| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_28736 |
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| Symbol | |
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| ID | 4999395 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009355 |
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| Strand | - |
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| Start bp | 216533 |
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| End bp | 220608 |
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| Gene Length | 4076 bp |
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| Protein Length | 1313 aa |
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| Translation table | |
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| GC content | 53% |
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| IMG OID | 640414816 |
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| Product | predicted protein |
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| Protein accession | XP_001415771 |
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| Protein GI | 145341341 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00606] rad50 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGCACGG TGGATAAGGT GCGCGCGAAG ACGCGCGGCG ACGCGGTGAC GCGCGATGAC
GCGCGCGAGC TGTCGATTCG TAGATTTGAA CGCGGCGCGC GCTCGACGAA CGCCAACTGA
CGCGATCGAC GCGAACGGCG ACGCGCGCGC AGCTGCTCAT AAAGGGCATT CGCTCGTTCT
CGCCCGAGAA CGAGCACGTG ATTCAGTTCC CGAAACCGCT GACGCTCATC GTCGGGCGGA
ACGGGGCGGG GAAGACGACC ATCATCGAGT GCCTGAAGAT GGGCTCCACG GGCGAACTCC
CGCCGTCGGC GAGGTCCGGA CAGGCGTTCA TTCACGATCC GAAGGTCGCG GACGTCACGG
AGGTGAAGGC GCAGATCAAG TTGCGGTTTA GGAACGTGAT GGGGAAACCG TTCGTGGTGA
TTCGGTCGTT TCAGTTGACG CAAAAGGCGA GAGGAAAGTT GGAGAAGAAG GATTTAGATA
GCGTGATTCA GAGCGTCGAT GACGGTGGGA AGATGGTGAG CATATCGAGG AAGTGCGTAG
ACATCAACGC CGAAGTGCCG GCGCTGATGG GGGTGTCAAA GGCGATATTG GAAAATGTCG
TCTTCGTGCA TCAGGAAGAA TCGAATTGGC CGCTCGGCGA CAGCGCGGGA CTGAAGAAGA
AGTTTGATGA GATTTTTAGC GCGACAAAGT ACACGAAAGC GTTGGAACAC ATACGAAAAT
TGAAAACCGA GCAAACTGGA TTGATTCGCG AGTTCAAAGG TAAGGTTGAG TCGCTGAAGA
TTCAAAAAGA CCACGCAATG AAACTGCGCG CGACGTTTGA AACGAACCGA GACAAGGCGG
ATGATTTGAC CGATCACATC TCGTCGCTCG AAGCCAAGAT ACAAGCGGCG CAGGAGGAAA
TCGCTCAGAT CGAAGCAGTG TTTTCTTCGG TGCGACAAAT TCATGAGAAG CGTAATGCGT
TGATTGCTCG CCGCGAAGCG GTGACTTCGG AAAACGCACG TAAATTAGCG AGCATGAACA
CCGAGTTAAC TGAGTCACTG GAAGAGCTCG AGAAAATGGG TGATACGTTC AATCAAAAGT
TTGCGACTAT GAAGCAAGAA CGCGACGTGT TAGATCGCAA GCTTAACGAC GTACGTTTAG
AGATGGAGGC TTTGAAGGAA CATCGTGAGC GCATGATCAA GACTGCCGGT AGACTGGGCG
CGGAAGCTGA AGCGCACACA AAGCGCATCG CGGAGCGTTC GGTGTTTGCT CAGTCAATTG
CGAAGAAGTA TCCTGAAATA GGTGTCGAGA TCTCGCCAGA AATCGCCCCG AATGCCCTGT
CGAACGCGCT GGACTCGCGA CTGTCGATGC GCCAACAGGC GATTGACAAG ATGCGCTCAA
AGCACCGTGA TTTAGACACT GCTTGTGGGG CAAAAATCGA TGAAATCACC GAAAGGTTGA
GCTCGCACAC GCAACGAATC CAAATCATCA ACGAGCAGCA AGCTGCGCGT AAAGCTCGCC
TCGAAGTGAT CAACAAGGAA CTAGGCGAGA ACGCGGTGAA CGAATCGGCG ATAGAGGAAC
TCGAAAACCG TGTGAAGCGA GCAAACGAAG CGTACGCGTC CAAGAGCAAA TCTGATTTCG
CCACACAGCT GAAGGTGGAT ATGGAGCAAG CTGATCAGAA ATTAGGTGAG CTTGAGCGAG
AGATGACGAA GTTGCGATCG GAGCAAGAGA GCGCCGTGCA AGCAGGCGAG AGCGAGATGA
AAGTGCGTAT GAAGAAGGAG GAATATTCCA CTAAGAACAA CACACTTGAA ACTATCGTCG
ACAGCCGTGC TGAGCAACTA CGCGAAATCT TCGGTGCGGC GATGCCGATG AACATAGAGC
TCAAGGATGC AGTGATTGAA AAATTGAACG AACTCTCCGA GGAGACGGCC AACGCGCAAA
CCGAATGCAA CACAAATACT TCGAACGTCG CCGTGCTCGA ACACGAGCTC GAAGCCGCGA
GGGCCGCGTT ACAAAGTGAT AGAAGAGAAT TAGAAGAGAT CAAGTCGACT GAGAAGATAG
AAGCAAACGT TCGATTACTT GGCGCGGGAG GTTTTGCTGG ATATCGAGAA GCTCTCGACG
CCGTCAATCG CGAAGTCACT GACGTTGAGG AGAACCTTAC AACGCTTACG GCGTTACAAA
CCTTGTTTTC GAAGTTTGTC GCCGAAGCCG AGAAGAACCA GACGTGTTCC CTTTGCAAGC
GGGGTTTCCC GTCATTCAAC GCTGCGGATA CTTTCATTCA AGATATGCAA ACAAACATCG
CCAACGCTCC GGCACAAATT GCCTCATTGG AGGAACGCGT ACAAAAGACG CGCGAACGCC
GTGAATTGCT TCAAGCTTTA AGCGAGACTG CATCGCGATT CAAGGCCGTG TCTGAAAAGA
TCCCCAATTC CGAACGCGAT GTCTCGAATT TGGAAGACAG TTTAGCCGAC GCGCAAGCGA
AGAAAAAAAA CGCGGAGGAG AACCTTGCAG ACAGGCAGCG CGCGAGAGAG TCGACGGCGT
CTTTGCTCGA AGACGCCGGA AACATTTCGC GACTTGCCAA GGAAGTTGAC GCACTGCAGA
GCACGATTGA TTCTTTGGAA TCTCGTTACC TCGAATCGAA TGGTGAGACG CGTTCGGCGC
TGGACATCTC CAACGAGATA GAGATGCTCG ACGTGAAGCG CGAAGCCGCC GATCGTGAAA
AGGCAATTTT GGTCAAGCGT AAGGAGCGGC ACGAAACGGA GTTGTTAAAC CTAGAGCGGA
ATGCTCGTGA CATGCGCGAG GAACTGCTCG TGGCGCAGTC GCGCGGCGAG AAACGCACAC
AGCTCAAGGC GGAGATGGCC GACATCTCTA AGGCGACAGC GGAGAGCGCT GCGGAGCAAA
AGCGAATGGA GGAAGAGCGC GCTCCTGGCC TCGCAGAGAA AGAAAAACTC TCGAGTGAGC
GTGAATCTCA ACGCAAGACG CACGCTCAAG AGCAAGACGC GCTTGAAAAC GAAATTCGCG
AGTTGCAACG CGTCGTTGAC ACGATCACCA GTATGAGCAA GACAATCGAG GCGGCGGATG
CTGCGGGAAC TTCTGAGCGC TTAGTAGAGC ACAACAGATC GCTCGAGGAG ACGAATGGGA
AAATAGAAGA GCTTGAGGCC AAGTTACAGA CAAGAGGCAA ACAACTCAAG GCGAAAGAGG
AGGTCATCGC GCGACAAAAC GATCTGAAAC GCGAGTTGGA AGATAACATC GCGTTCTTGA
GGGGTAAGCG AGAAGAAGAA ACGATATTGA AAGAGATCGA TCAACTCACC GCGGAGATGC
ACAACATGGG CCAGATGCCG GATGTGGAAA AGAAGCTGCG GCAAGTGACG AACGTCAAGA
ACGATTTCCG TACCGAGGCT GCCGAAGCGC AGGGTCGAGT GAAGGCGCAT CGTGAGGCTA
TGAAAGCCGC TGGTGACCAG CTGAAGGGTG CCGAGTACAA CAACATCGAG AAACGACTGT
CGAAACAACT CGTCGAATTG AAAACCGTCG AAATGGTGAG CGATGACTTG GATCGATATC
ACAAAGCTCT TGACAAGGCA CTGATGTCAT TCCACGCGAC CAAGATGGAA GAAATCAACA
AGGTTGTTCG CGAATTATGG CAACGCACCT ACCGCGGTCA AGATATTGAT AGCATCCAGA
TCCGAAGCGA CTCTGACGGC ACTACCGGCA GAAGCTCGTA CAACTATCGC GTCGTTATGT
TGTGCGGCGG CGCAGAGCTG GAAATGCGCG GTCGTTGCAG CGCCGGACAA AAGGTTCTCG
CGTGTTTGAT CATTCGCCTT GCACTCGCTG AGACGTTTTG CTTGAACTGT GGGATCCTAG
CGCTTGACGA GCCGACGACA AATCTCGACG CGCCAAACTC TGACGCTCTC GCGAGGTCGC
TTATCGAAAT CATGAAGAGC CGCCGTGATC AAGAGAACTT CCAATTGATT GTCATCACGC
ACGACATGGA GTTTGCTCAC GTACTCGGTC AGCGCGAACT CACGGATTAC TATTGGAGAA
TCACAAAAGA CGACAATCAG CATTCGCACA TCGAAAGAGA GGACATTTAT GACTAA
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| Protein sequence | MCTVDKLLIK GIRSFSPENE HVIQFPKPLT LIVGRNGAGK TTIIECLKMG STGELPPSAR
SGQAFIHDPK VADVTEVKAQ IKLRFRNVMG KPFVVIRSFQ LTQKARGKLE KKDLDSVIQS
VDDGGKMVSI SRKCVDINAE VPALMGVSKA ILENVVFVHQ EESNWPLGDS AGLKKKFDEI
FSATKYTKAL EHIRKLKTEQ TGLIREFKGK VESLKIQKDH AMKLRATFET NRDKADDLTD
HISSLEAKIQ AAQEEIAQIE AVFSSVRQIH EKRNALIARR EAVTSENARK LASMNTELTE
SLEELEKMGD TFNQKFATMK QERDVLDRKL NDVRLEMEAL KEHRERMIKT AGRLGAEAEA
HTKRIAERSV FAQSIAKKYP EIGVEISPEI APNALSNALD SRLSMRQQAI DKMRSKHRDL
DTACGAKIDE ITERLSSHTQ RIQIINEQQA ARKARLEVIN KELGENAVNE SAIEELENRV
KRANEAYASK SKSDFATQLK VDMEQADQKL GELEREMTKL RSEQESAVQA GESEMKVRMK
KEEYSTKNNT LETIVDSRAE QLREIFGAAM PMNIELKDAV IEKLNELSEE TANAQTECNT
NTSNVAVLEH ELEAARAALQ SDRRELEEIK STEKIEANVR LLGAGGFAGY REALDAVNRE
VTDVEENLTT LTALQTLFSK FVAEAEKNQT CSLCKRGFPS FNAADTFIQD MQTNIANAPA
QIASLEERVQ KTRERRELLQ ALSETASRFK AVSEKIPNSE RDVSNLEDSL ADAQAKKKNA
EENLADRQRA RESTASLLED AGNISRLAKE VDALQSTIDS LESRYLESNG ETRSALDISN
EIEMLDVKRE AADREKAILV KRKERHETEL LNLERNARDM REELLVAQSR GEKRTQLKAE
MADISKATAE SAAEQKRMEE ERAPGLAEKE KLSSERESQR KTHAQEQDAL ENEIRELQRV
VDTITSMSKT IEAADAAGTS ERLVEHNRSL EETNGKIEEL EAKLQTRGKQ LKAKEEVIAR
QNDLKRELED NIAFLRGKRE EETILKEIDQ LTAEMHNMGQ MPDVEKKLRQ VTNVKNDFRT
EAAEAQGRVK AHREAMKAAG DQLKGAEYNN IEKRLSKQLV ELKTVEMVSD DLDRYHKALD
KALMSFHATK MEEINKVVRE LWQRTYRGQD IDSIQIRSDS DGTTGRSSYN YRVVMLCGGA
ELEMRGRCSA GQKVLACLII RLALAETFCL NCGILALDEP TTNLDAPNSD ALARSLIEIM
KSRRDQENFQ LIVITHDMEF AHVLGQRELT DYYWRITKDD NQHSHIERED IYD
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