| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_24216 |
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| Symbol | |
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| ID | 5000957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009357 |
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| Strand | + |
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| Start bp | 330386 |
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| End bp | 332341 |
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| Gene Length | 1956 bp |
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| Protein Length | 614 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | 640416378 |
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| Product | predicted protein |
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| Protein accession | XP_001416625 |
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| Protein GI | 145344201 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000105574 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.257182 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CGCTTTGGCT CTGAAGCACC GCGCGAACCG ACCCGGTCGT CGTGCGCGAA CGATGACTTA
CTCACACATA CCTTTCGCGC ACTGATGCAA GCGCACTTTC CCTCAATCAC GAGCGAGCAC
CGGCCAACTG CTGTTCGGAT TGGGCGCACA AAACACAAGG CGGCACGAAG GCAATCGTCG
AGGTTCGTAC CGACAATGGC ACTCGACTCG ACGATAGATC CTATCTCGTT CGCCCCCGAT
GAAGCTTTGA CGAAACTGTC CAACTTAATG ACCCAAGGAG TGAAATACCC GCAACTGAGA
GCGGTGGTCG TGAGCTGGCT CGCCGAGGTG CGCGAACCAT CGACTCTCGT TGCGGCGTGC
ATCGACGTCA TCTTCACCAC CCTGCGCGAT CAGTACGAGA TCGGACGCGA AGAAGACGAT
GATGGCGAGT TACTGATTTG CATGTACTTG TTGTTGGAGT GCCTCGGTAG AACTCCCGGA
ACGCGGGAAG GGCGAGAACG GAGACGCTTT ACCAGCACCG TCACGAGAGG CGTAGTTTTG
TGTGATCGAA GTCGCGCACA CGTAGGTAAA TTGGTACATT CAGCGATGAC CACGACAAAT
GATGTCATAC CAAGCCGTGC GATCGTTCGC TTGATCGAAA CATTTGGGCT TGAGTTTGAG
GATTTGAACT TTACGAGCTG CGCAGCTGCT GCCGAAGGCG TCTCAGGCTT CGTTCGACAG
CTTTTAGAAG ACGGCAAACA GAGCTCGGCC ATGGCGCTCA TTTTTCACTT CAACCTGGAA
GAGTTCGCAA CAAATGAAAC ACTGCAAGGT TTGGCGCAGT GTAATGAATT TTCACTCGCT
CTTGAGTTTG TTCAACTCGA ACCAACTCTG GCCAAAAATT GGATTGAGTT TTGCGTGCAC
CAGGGCGTCC ACGAGCACCA TCACGCTGCT TTGCGACAAG CACACAAAGT TGTCACGATA
TTTGAGATGG AAGCCGAGTT TCCGGACGTG CGCACGCAGT ATTACAAGTC GACTATTGCG
AGAATGATTG CGAAAGGACA ATTTGAAGTC GCGCTCAAGC GCGCAGGCGC CGAAATCAAT
CTTCAAGAGT TTGTTGTCGA ATCTCTTGCA GCGATCGAAC AATTCGAATA CGCTTTGGAG
TTCGCAAATA GGTGTGGACT AGAGTTTGAC TGTGATCCAG TGGAGCTGGA GAAGTTAGTC
GCACGCAGGA GAGCAACGTT TTTCCAGCTT CCAGAGCATC TCTCTCTCGA CGCGAACGTC
GTCTTTGTTG ACGATGCAAA GAGCTTGCAT TACATCTCAG AACGGTACCT CGCAAATAAA
AAAGACATTG GAATAGATAC TGAATGGGGT GCTGCGGTGG GTGAAGACGC GGACAAGGAA
GACACGAGTC AGGTAGCTAC TCTACAACTT GCGTCAGAAG ACGGCGTAGC AATTTTAGAC
TTGCCAGTTC TAGTTCAGAG CTGTCCCGAG GCGTTAGAGG CAACGATCGG GCGAATGTTT
CAGGACGATA AGGTGTTAAA ATTAGGGTTC GCAGTTCAAG AAGACTTGCG ACGCTTGGCA
AAATGTCACC CTGCGTCTTT CGGCAACGTA CGCAATGTGG CCGACTTGCA ATCGTTGTGG
AAATTAGCTG TGTCAAAGGC GCGAATGACG AAAGAGACTC GTGATTTTCC ATGGGCAACC
GACGAAGAAC TGTCACGATA TCAACCCGTT GGCTTATCGA CTATGGTCGC TGCCGTACTC
GGGAAACCGT TGGACAAGAC GATGCGGATG TCTGATTGGT CGAAACGTCC GCTGACCGCA
CAACAGCGAG TGTATGCGGC ACTCGACGCG TGGACTCTGG TCGAATCGCA TCGTTCGCTC
CTCGCATCTC ACGCCGATCG ATACATCGCA CTAGTCGATC AAGTGAACAA ATCATATGAG
TTCAAATAGC GCATAATCCC ATGGTTGTTG TATCAA
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| Protein sequence | MQAHFPSITS EHRPTAVRIG RTKHKAARRQ SSRFVPTMAL DSTIDPISFA PDEALTKLSN
LMTQGVKYPQ LRAVVVSWLA EVREPSTLVA ACIDVIFTTL RDQYEIGREE DDDGELLICM
YLLLECLGRT PGTREGRERR RFTSTVTRGV VLCDRSRAHV GKLVHSAMTT TNDVIPSRAI
VRLIETFGLE FEDLNFTSCA AAAEGVSGFV RQLLEDGKQS SAMALIFHFN LEEFATNETL
QGLAQCNEFS LALEFVQLEP TLAKNWIEFC VHQGVHEHHH AALRQAHKVV TIFEMEAEFP
DVRTQYYKST IARMIAKGQF EVALKRAGAE INLQEFVVES LAAIEQFEYA LEFANRCGLE
FDCDPVELEK LVARRRATFF QLPEHLSLDA NVVFVDDAKS LHYISERYLA NKKDIGIDTE
WGAAVGEDAD KEDTSQVATL QLASEDGVAI LDLPVLVQSC PEALEATIGR MFQDDKVLKL
GFAVQEDLRR LAKCHPASFG NVRNVADLQS LWKLAVSKAR MTKETRDFPW ATDEELSRYQ
PVGLSTMVAA VLGKPLDKTM RMSDWSKRPL TAQQRVYAAL DAWTLVESHR SLLASHADRY
IALVDQVNKS YEFK
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