Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_119545 |
Symbol | Hda2 |
ID | 5000186 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009356 |
Strand | - |
Start bp | 521520 |
End bp | 523110 |
Gene Length | 1591 bp |
Protein Length | 487 aa |
Translation table | |
GC content | 47% |
IMG OID | 640415607 |
Product | histone deacetylase |
Protein accession | XP_001416418 |
Protein GI | 145343628 |
COG category | [B] Chromatin structure and dynamics [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAGA AAATTGCATA CTTTTATGAC CAAGAAGTGG GAAACTTCTA CTACGGACAG GTGAGAAACG AAGAGGGATC ACGCAACAGC TTCTGATTGT TACGTTCGTA GGGACATCCA ATGAAACCGC ACCGTATGAG AATGACACAT AATCTGCTCT TACACTACGA TTTGTACAAA GACATGGAGG TACGTTGTTG CGATGATAGC GGTGGACTAG CCGTTGAAAA TCACGTGTTC CATGATCTTG ACTCTCCACG TGTAGGTGTT TCAACCCACG CCCGCGCAAG CCGATGACAT GACGCAATTT CATAGCGACG AATACATTGA ATTTCTACGC CTTGTCACCC CTGATAATCA GCATGAACAC ATGCGCCAGT TGAAGAGGTT CAATGTTGCT GAGGACTGCC CGGTATTTGA CGGACTGTTC CGCTTCTGCC AACTGTACAC AGGCGGCTCT GTTGGAGGGG CTGTCCGCTT GAATCATGGA CTATCAGAAA CTGTCATAAA TTGGTCTGGC GGGCTTCATC ACGCAAAAAA GAGTGAAGCA AGTGGGTTTT GCTATGTTAA CGATATTGTA CTTGCGATAT TGGAGTTACT CAAGCAACAT CAGCGGGTTT TGTACATTGA TATAGATATT CATCACGGTG ACGGGGTTGA AGAAGCGTTT TACACGACAG ACAGAGTAAT GACGGTTTCG TTTCACAAAT TCGGCGAATA TTTCCCAGGG ACTGGGCACT TGCAGGACAT CGGCCAACAT GCTGGCAAGT ACTATAGTGT CAACGTACCC CTAAAGGATG GAATAGATGA TGAAAGCTAC GAGCTTCTCT ACAAGCCGTT GATGTCAAAA GTCATGGAGA TCTATCAGCC CGATGCAGTT GTATTTCAAT CTGGGGCAGA CTCTCTTTCT GGAGACCGTT TGGGTTGTTT CAATCTGTCC ATCAAAGGTC ACGCAGAGTG CCTCAAATAC ATGACTACGT TCAACGTACC TTTACTTGTA CTTGGGGGCG GTGGTTACAC GATACGGAAC GTAGCCAGAT GCTGGGCATA CGAAACGGGT TGCTTACTTG ATCGAGAACT GGTAGATGCT ATGCCACAAA ACGACTACTC AGAATATTTT GGCCCAACTC ACACACTGCA TATCCAACCG AGCAACATGG AGAATCAAAA TACTCGCGAA TATCTTGAAG GGGTTCGAGC ACATCTTTTG GAAAACCTGT CGAAGATGAC CTGCAAACCC AGTGTGCCTT TCCACGAAGT ACCACGTGAT TCGACTAATA CTCGTAATGT CAGTGTTGAC GTCGAGCATA TTAGCGAAAA GAGCGAAAAG GGCTTCTCAG CCAGCCTTGA TAAATCTCAA TACGAGAATG AGCGTCACGT CGCGGCTCTG CGTCGTCAAC AAAGTATGGT TGTACGAGAT GATATCCCGA GCTCGACGAT CTCTATTATG GAGAACACAC CGAGCTCTGA GAAGAGTCAT GATTTACCGA TATCGGCCAC AGGTCTGCCG CAAACACATA CTCCACGGAG CGACGAAGCA ACGGCGATGA CGATGTTCCC AAGCGTTTCG AATAAAAAAG AAGGAATTTA G
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Protein sequence | MKKKIAYFYD QEVGNFYYGQ GHPMKPHRMR MTHNLLLHYD LYKDMEVFQP TPAQADDMTQ FHSDEYIEFL RLVTPDNQHE HMRQLKRFNV AEDCPVFDGL FRFCQLYTGG SVGGAVRLNH GLSETVINWS GGLHHAKKSE ASGFCYVNDI VLAILELLKQ HQRVLYIDID IHHGDGVEEA FYTTDRVMTV SFHKFGEYFP GTGHLQDIGQ HAGKYYSVNV PLKDGIDDES YELLYKPLMS KVMEIYQPDA VVFQSGADSL SGDRLGCFNL SIKGHAECLK YMTTFNVPLL VLGGGGYTIR NVARCWAYET GCLLDRELVD AMPQNDYSEY FGPTHTLHIQ PSNMENQNTR EYLEGVRAHL LENLSKMTCK PSVPFHEVPR DSTNTRNVSV DVEHISEKSE KGFSASLDKS QYENERHVAA LRRQQSMVVR DDIPSSTISI MENTPSSEKS HDLPISATGL PQTHTPRSDE ATAMTMFPSV SNKKEGI
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