Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_10250 |
Symbol | |
ID | 5003454 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009362 |
Strand | - |
Start bp | 446976 |
End bp | 447914 |
Gene Length | 939 bp |
Protein Length | 243 aa |
Translation table | |
GC content | 57% |
IMG OID | 640418875 |
Product | predicted protein |
Protein accession | XP_001419383 |
Protein GI | 145349937 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0592029 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.114227 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTAGCGATTG AATTGGTGCG AGACGAGACG CCGTTGGACG TGGTGTTTGA GAATGATGAG TTTTTGGTGG TGAATAAACC GCCGAATCTG AGGTTTCATC CGAATCATAG ATTTGAGGGG AATTCGTTGT TGTCGCGGGC GTTGCACCAT ATGGACGGGG CGACGCCGTA CATCGTGCAT AGACTCGATA TGGACACCTC GGGCGTGGCC GTGTTCGTGA AGAAGCAGCA CTTGGTGGCG AATGTAGCGG GACAGTTTCA AGAGAAGACG GCGAAGAAGA CGTACCTGGC CGTGTCTGTG GGTGTCGTGC CGCCTGATTG CGGCGACAGC TTCATCGTAG ACGCGCCCAT CGGTGACCAC GGAATCGTGC AGGAAGCGCG CACGGTTGAT TTCAGCGGAG AAGGAAAAGA CGCGAGAACG ACGTGCGAAA TCATCGCTCG TGCGAGTACT TCGCTGTTCG ATATCAAGGA CGAAAGCGTG GCCGCGATGA CGACGCCAAA AGGGGTGTCG CCTATGACAG CGTCGCCGCG AGCTCCGCCG GCCGCCGTCG CCGCGCTCGT TCGCGTGACG CCGCTGACAG GTCGAACGCA TCAGATTCGC GTGCACTTGG CGCATGCAGG CTTGCCTATT GTATCCGATG CGCTGTATGG GCCGCACTTG CGATGGAGTG CGCAAAGCGA TGAAGAAAAA CCGAAAATGG TTTGGAGTGC GGCGCAACTC GCCGCGTGCA ACTCTGAAAA TCCGACGCAG ATGCACCAAC TGACGCCTCC GGACAGTCGA GACGCGCGAG AACCGTACGA CGATTGGGGT GGGGCTTTGA GTATTCGAAG ACAAGCTCTT CACGCGTTCA ATCTCGAGCT CAAGCATCCA GAAACAGGTG AATCGCTTAC GTTTCAGGCA AAGATGCCGA GCGACATGCG AAGCGTGTGC GACGCGCTT
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Protein sequence | LAIELVRDET PLDVVFENDE FLVVNKPPNL RFHPNHRFEG NSLLSRALHH MDGATPYIVH RLDMDTSGVA VFVKKQHLVA NVAGQFQEKT AKKTYLAVSV GVVPPDCGDS FIVDAPIGDH GIVQEARTVD FSGEGKDART TCEIIARATP PAAVAALVRV TPLTGRTHQI RVHLAHAGLP IVSDALYGPH LRWKPYDDWG GALSIRRQAL HAFNLELKHP ETGESLTFQA KMPSDMRSVC DAL
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