Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OEOE_1019 |
Symbol | |
ID | 4415656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Oenococcus oeni PSU-1 |
Kingdom | Bacteria |
Replicon accession | NC_008528 |
Strand | + |
Start bp | 952147 |
End bp | 952776 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639669220 |
Product | RNase HII |
Protein accession | YP_810593 |
Protein GI | 116491049 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0164] Ribonuclease HII |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0388624 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATTAG AGGAAATAAT TGATTCTTTC CGGATTCGTT TTAAATTTGA AAATGAATTA AATGACGAAG GATATCAAAT TATTGCTGGA ATCGATGAAG TTGGAAGAGG CTGTGTTGCA GGGCCGGTCG TGGCCTGTTC TTGCATTTTG CCAGCCAATT TTAATGTATC CGAAACATAT GATTCGAAGC GTTTCAATAA AAGACAAAGA TTTTTATTGG AAGAAGAAAT CAAAAAAACA TCCTGTCTTT TTGCCTTTGG TGAAGCTTCC GTAACGGAAA TAGATCTAAT AAATATATAT CAGTCTGCCA GATTAGCTAT GAAAAGATCA GTTATGAATC TTTTGCAAAT GCCTGATGCT TTGCTAATTG ATGCAATGGC TGTTGATTTA AATTTAAAAC AGCTCAAAAT TATTCACGGC GATCAATTAT CCAATTCAAT TGCGGCTGCT TCAATTTTGG CCAAGTGTCA TCGTGACCGA ATTATGATTA AAATGGCCGA AAAATACCCT GAATACGGTT TTGAACGCAA CGTTGGGTAT TTGACAAGTG AAGCAAAGAA AGCGCTTTTA GAATACGGAA TTACACCGAT TCATCGAAAA ACTTTTGCTC CAATTTCAAA ACTGATTTAA
|
Protein sequence | MKLEEIIDSF RIRFKFENEL NDEGYQIIAG IDEVGRGCVA GPVVACSCIL PANFNVSETY DSKRFNKRQR FLLEEEIKKT SCLFAFGEAS VTEIDLINIY QSARLAMKRS VMNLLQMPDA LLIDAMAVDL NLKQLKIIHG DQLSNSIAAA SILAKCHRDR IMIKMAEKYP EYGFERNVGY LTSEAKKALL EYGITPIHRK TFAPISKLI
|
| |