| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_0577 |
|---|
| Symbol | |
|---|
| ID | 4416160 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | + |
|---|
| Start bp | 554781 |
|---|
| End bp | 555365 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639668798 |
|---|
| Product | Holliday junction resolvasome, DNA-binding subunit |
|---|
| Protein accession | YP_810185 |
|---|
| Protein GI | 116490641 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0632] Holliday junction resolvasome, DNA-binding subunit |
|---|
| TIGRFAM ID | [TIGR00084] Holliday junction DNA helicase, RuvA subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATGACT TTTTGACGGG CATCATTAAA ACGATCGCGG CGGGTTACGT GGGCATCGAT
GTTAATGGAA TTGGTTTTCG CGTTTTTACG CCCAACCCTT ATGAATATAA TCAAAACGAT
CAAACGACAA TCTTTACTGA ACAAATTGTT CGTGATAATC AGATTAGTCT TTATGGTTTT
AAAACAGTTA AAGAAAGGAA TCTTTTTCAA AAACTGCTCA ATGTTTCCGG AATCGGACCA
AAATCGGCCT TGGCAATTAT TGCCGGTGGC GATCGTGATG GGCTGATTGC CGCTGTCGAG
AACGGTAAAC CGAAATATTT AACTAAGTTC CCGGGTATCG GAAATAAAAC CGCCCAACAG
ATCGTTCTTG ATCTCAAGGG AAAATTGGGC GATTTTTCGA AAAATATCGC TCCGATGAAG
AATCTGTTGG AAAATTCTGC TGAATTGGAT GATGCCTTGG CCGCCCTAGT GGCTTTGGGC
TTTTCTTCAA AAGAAGTTAA CAAAATAAAT CCAAAATTAG CCAGTCTTGG TGAATTAACA
ACCGATGCAT ATATTCAAAA AGGACTTAAA CTATTAACCA AATGA
|
|---|
| Protein sequence | MYDFLTGIIK TIAAGYVGID VNGIGFRVFT PNPYEYNQND QTTIFTEQIV RDNQISLYGF
KTVKERNLFQ KLLNVSGIGP KSALAIIAGG DRDGLIAAVE NGKPKYLTKF PGIGNKTAQQ
IVLDLKGKLG DFSKNIAPMK NLLENSAELD DALAALVALG FSSKEVNKIN PKLASLGELT
TDAYIQKGLK LLTK
|
|---|
| |