| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_0308 |
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| Symbol | |
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| ID | 4416234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Oenococcus oeni PSU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008528 |
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| Strand | + |
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| Start bp | 296671 |
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| End bp | 300156 |
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| Gene Length | 3486 bp |
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| Protein Length | 1161 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 639668556 |
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| Product | DNA helicase/exodeoxyribonuclease V, subunit B |
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| Protein accession | YP_809949 |
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| Protein GI | 116490405 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3857] ATP-dependent nuclease, subunit B |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02773] ATP-dependent nuclease subunit B |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTTAG AAATCGTCAG GGGTTTTGCT GATAGGGATT TTCGCAGTGA ATTATTAGAA
CGAATTTATG AAAAATACCG GATCGATCCC CAGGCGCGTT TTTTTTATAT TGTTCCAAAC
CATATTAAGT TCTCTGCCGA AGTGGACGTT TTAAAGAAAT TTGGTTCTTT GTTGGGGAAA
AATGATCAAG AAGCCCAAGC TTTTTCTCGT CTACAGGTTT ATTCGTTATC CCGTCTCGCC
TGGGCTTTGA CCAAAGAACG CGACCAAAAA ACAATTATCT CCAACCAGTC TGTTTCAATT
CTGGTTGGAC AGGTTTTAAG AGAACTTCCG ATTGAAAAAC TGAATATTTT CGCCCGTTCG
GCACGAATGC CTGGTTTTGT TGCTAATGTT GCCGAGCAAT TGTTGGAGAT TTGGCGTTCG
GGCCTGACAG CAAGCGAAAT TTTGCCCCTT CATCAATTTG ATGATCGTTT ATCGGAAAAA
ATTAAAGTAC TTGCGTTAAT TGAAACAAAA ATATTGCCGA GTTTGAAAGA TTATTCTTTA
CCTGACGATG CTCTCAGAAA TTTTGCCACT CAAATCAGCA AGATTGATTT AAAAAATTGC
AATTTTTACT TCGAGGGCTT TTCCGGTTTC ACAGCAAGTG AATTATCACT CGTCAAGGCT
TTGATTTCAG CAGATAGAAA AACACAATTG GGCAAAAAGT CCGAAATTGT TTTTTCATTG
ACAGGGGAAC AGCAGAGCGA TCAATATGGG GAAGGGAATT TATTTTATAG AGCCAATCAA
CTCTTTAAAA ACGAATTTTC TTCAGCACGA GTCTGGATCG TTTCCAACAT CCGCCCACTA
TCCGAGTCGC AGCTGAATTT TGAGCAGAGT TGGCGCGAGT TGGAAACACA GGGTTTTACA
AGTCAAAAGC GTTCTTTCCC ACAGACTAAG ATTGTTGTCA GCAGCGATCA GGAACATGAA
ATCGACTTTG TTGCTCGCTC GATCAGACAA CGGTTAGTTG ATAACCCGAA ATTACGTGCA
AAAGACATTC TCGTACTTGC TCAAAGACTT GACGGATATA AAAATATTAT TCCAAAAATT
TTTGATCGTT ATGATTTGCC TTATTTTCTT GATAAAGATA CGCGTATGTC TGATCATCCG
CTTGCTTCTT TAGCCGAGAA CTTATTGGGG TCTTCTAATG AGTTTGCCTA TGAACGAATT
ATGAAAATTT TCCGAACCGG TCTTTTGTCT TGGCAGCTAG AGGACAATTT TCAAACAGCT
TTGGATTATT TGGAAAATTA TTTATTGGCC AACAATCCAA AAGAAAAAAA TTGGCGCCAA
GAAGAATTCC AGCTGATTCA GATTTCAGAT GAGCAGGATT TAAATGACGA TCACAAAATC
GACCGGCAAA TTAATGCATT GATTAATCGA ATGCGTCTTT TTATAATTAA GATTCTTGAC
GATTTTCAAG AAAAATTCGC AAAAGTCGAA AATTATCATC AAGCCGTTAA AACACTTTAT
AACTGGCTGA CCGATCAACA AGTTGACCAA GTTTTGCTCA ATCAAGCTAA TGATGGAGAC
GATCGCGGCC AGCAAACCTG GAAATTGCTT CTTTCGACTT TAGACGAAGT AGATCAACTA
ATCGGTGATA AAAAATACAG CCAAAAAGAT TTTTTGCAAA TTCTAAAAGA CGGTTTTGCC
GCTGCCAGTT TCTCCGGTAT TCCTGCCAGC CTTGATCAAA TTACCGTTTC CGAAAGTGGA
ATTGTTCAAA GAAATGATTT TAAAGCGCTT TATTTTATTG ATGCCAGCGA TGCTAGTCTT
CCCGCTCAAA CTAATTCCAG CAGTTTAATC GATGATTTCG ATCGTTTGCA ATTAATCGAT
GATTTCTCAA AAGCACAAAA ACCTTACTAT CTTCAGGATA CTAGCCGGCA GGAAATGACT
GCTGAAAATT TCCGTTTTTA CTCTTCTGTT TTGTCGGCGA CTGATTCGGT TACTTTCTCC
TATTCGAAAC TGAGACTTGA CGGAAAGCAA AATGAGTTAT CACCTTATTT AAGGCGCCTT
TCTTTGAAAA ATGTTTCTGA CCTTAAGATT GAAAAAATTC CCGATCTGCC TCAATCACAA
GCCGATTTGG TCGATTATTT GGGAACAGCA AATAGTTCGG CTGCCATTTT GAGTCAAACT
GCGCAAAATT TTGGTGAAGA TTTTATTGAC GGTCTGACAG ATTTGCTGAT TAAACGCAAT
CCCTATTTTC AAAGGATACT TCAGGCCCTT CATTACAACA ACCAGCCGGT TACTTTGCGG
CCGGAATTAA TTAAAAAGTT ATTCGGTGAG GATTTAAGAC TTTCTATTTC CCAAATTGAA
AAATATTACA GCAATCCTTA TGAATATTTT CTCCAATACG GTCTGCGACT GAAGAAGCGT
AATCAGTTCA CAGTCGATGC CGCTTTGTCC GGTACTTATT ATCATTCAAT CTTCGAACAG
GTTATTAACC GTTTAATAGG TAAAAGGACC GATTTTCATG ATTTAAGCGA TCAGGAATTG
AAAAAACTCA GCCAAGAAAG TGCCCAGAAT TTGATCGAAT TGCCTGATTT TCAAATTTTG
CAGTCCGATG ATCATTTTCG CGCAGTTGCT CGGAGCCTCA CTGATGACGT TTTGTTAACA
CTGAAATTAA TGCACAGGGC CAATCGATTA AACAACTCTC GTCCAATTAA AACAGAAGCC
GTTTTTGGAA AATTGTCTTC TGACCAACAG CGGGAGCAAT CTTTATCCGG TCTTGATTTT
ACGTTGGCAA ATGGTCGCAA GATTTATTTG CGCGGAAAGG TTGACCGAAT TGATCAACAG
GATCTGGAAC ATATATTTGG CACGATTATT GATTACAAAT CGAATGGAAA AGTATTTGAT
TTTCGCGATG CTTATGTAGG CACAGAATTG CAGTTATTGA CCTACTGGCT TGCTTTGTCA
AAGAATAGTT CACGCATTGG AATCAATCAG CCTGGCGGAG CCGTTTTTGT ACAGATAAGA
AACAAACCGG CTGACATTTC CCAAGCGTTG GCTCATCAGA TCCAACTAGA TCAACTTATC
GGTGATCGGG CCAAACAACA GGTGCCGGAT TTCCAATTTC ATGGTATTTT ACTTGATGAT
CAGAATTATT TAGCTAATTT GCAAACGGTC TTGGCCGGTC AAAAAGCCAA ATATTATAAT
TTCGGTTTAA CCAAAAAAGG TCAAAAAACG GCACGAAGCG ATTTGGTTTC CAAAGAAGAT
TTGACCGTCT TACTGAAACA TGACGAAAAA AAATTAGTGG AAGCCGGTAA CAAAATCATT
CATGGAGAAT TTCCGTTATA CCCGATTAAA AAGAATGAAC AAAGAAGCGC TTTAACATAT
TCTGATTACA CGGAAATTAT GAATTTTGAT AGAAATTTCG GTAATCAATA TAATAACTTG
ACTCGTTATC CAAAAAATAA AAGTGAATTG ATTTCAAAAA TGCGCGAGGA AGAAGGCGAA
AATTAA
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| Protein sequence | MTLEIVRGFA DRDFRSELLE RIYEKYRIDP QARFFYIVPN HIKFSAEVDV LKKFGSLLGK
NDQEAQAFSR LQVYSLSRLA WALTKERDQK TIISNQSVSI LVGQVLRELP IEKLNIFARS
ARMPGFVANV AEQLLEIWRS GLTASEILPL HQFDDRLSEK IKVLALIETK ILPSLKDYSL
PDDALRNFAT QISKIDLKNC NFYFEGFSGF TASELSLVKA LISADRKTQL GKKSEIVFSL
TGEQQSDQYG EGNLFYRANQ LFKNEFSSAR VWIVSNIRPL SESQLNFEQS WRELETQGFT
SQKRSFPQTK IVVSSDQEHE IDFVARSIRQ RLVDNPKLRA KDILVLAQRL DGYKNIIPKI
FDRYDLPYFL DKDTRMSDHP LASLAENLLG SSNEFAYERI MKIFRTGLLS WQLEDNFQTA
LDYLENYLLA NNPKEKNWRQ EEFQLIQISD EQDLNDDHKI DRQINALINR MRLFIIKILD
DFQEKFAKVE NYHQAVKTLY NWLTDQQVDQ VLLNQANDGD DRGQQTWKLL LSTLDEVDQL
IGDKKYSQKD FLQILKDGFA AASFSGIPAS LDQITVSESG IVQRNDFKAL YFIDASDASL
PAQTNSSSLI DDFDRLQLID DFSKAQKPYY LQDTSRQEMT AENFRFYSSV LSATDSVTFS
YSKLRLDGKQ NELSPYLRRL SLKNVSDLKI EKIPDLPQSQ ADLVDYLGTA NSSAAILSQT
AQNFGEDFID GLTDLLIKRN PYFQRILQAL HYNNQPVTLR PELIKKLFGE DLRLSISQIE
KYYSNPYEYF LQYGLRLKKR NQFTVDAALS GTYYHSIFEQ VINRLIGKRT DFHDLSDQEL
KKLSQESAQN LIELPDFQIL QSDDHFRAVA RSLTDDVLLT LKLMHRANRL NNSRPIKTEA
VFGKLSSDQQ REQSLSGLDF TLANGRKIYL RGKVDRIDQQ DLEHIFGTII DYKSNGKVFD
FRDAYVGTEL QLLTYWLALS KNSSRIGINQ PGGAVFVQIR NKPADISQAL AHQIQLDQLI
GDRAKQQVPD FQFHGILLDD QNYLANLQTV LAGQKAKYYN FGLTKKGQKT ARSDLVSKED
LTVLLKHDEK KLVEAGNKII HGEFPLYPIK KNEQRSALTY SDYTEIMNFD RNFGNQYNNL
TRYPKNKSEL ISKMREEEGE N
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