Gene Nwi_2392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2392 
Symbol 
ID3675383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2612855 
End bp2614033 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content56% 
IMG OID637713956 
ProductLPS biosynthesis protein 
Protein accessionYP_318998 
Protein GI75676577 
COG category 
COG ID 
TIGRFAM ID[TIGR03573] N-acetyl sugar amidotransferase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAGCT GTAGCAAGTG CTTGTTGCCC GAGACCGCCG AAGCTACGTC GTTCGACGAC 
ACCGGGTCAT GCAGTGTTTG CCGCCAGATC GAGGTGCGGG ACACCCAGAT CGACTGGGAC
GATCGTCACC GGCAGATGAT GGAACTGGTC GCCCAGTACA GGGACAAGGG TCTTTACGAC
TGTATCGTTC CGTACTCCGG CGGAAAGGAT AGCGTCTTCC AGCTCTGGTA CGTGGTTCGC
AAGCTCGGGC TCAAGCCGCT CGTGGTCCGG TTTGATCACT GGTTCTATCG GCCCCTCGTC
GAGGAAAACA ACACGAGTGT GTTCAAGCAA CTGGGGGTGG ACGTTCTGAA CTTCACGCCC
AACTGGCACG TGGTTCGGGA ACTCATGCTC GAGTCGCTGA AGCGCCGCGG TGACTTCTGC
TGGCATTGCC ACACCGGCAT CTACGCGCAC ACGATGCAGA TCGCGATCCG TTACGAAACG
CCGCTGCTGT TCTGGGGCGA GAGTCTTGCC GAGTATCAGT CGTTCTATTC CTATGATGAA
ATGGAAGAGG TCGACGAGAA GCGTTTCAAC CGCGCGATGA ACCTCGGAAT CACGGCCGAT
GACATGTATG AATTTCTCGG AGGCAGGGTC GCCAAGCGCG ATCTCTATCC CTTCGTCTAT
CCGCCTCGCA AGGAACTGAT GCGCATCAAG TGCCGCTCGA TCTGCCTCGG CAGTTACATC
AGGTGGGACA CCAAGAAGCA CGTCGAGATC ATCAAGCGTG AGCTTGGATG GAAGGGACAG
GAAGTCGAGG GTATTCCACC CGAATATGAC TATGAGAAGA TAGAATGCTT CTTCCAGGGA
GTCCGCGACT ACCTGAAATA CATCAAAAGA GGCATGGGGC GGACAAATCA TCTCGCCAAT
ATCGACATTC GAAACCACCG GATCACCCGC GAGGAAGGGG AGCGGCTGGT GAAGGAATAT
GACGGAAAAC GGCCGCCGAG CCTGGATCTG TTTCTCGACT ACCTGCAAAT CTCTGAGGAG
CAGTTCCTTG ATGTCGCCAT GCGGCACGAG GTCAGCCCGT GGCAGTTCTC GCCCAATCAG
GTCGAAAGCG GCAAGCGGAT GCCGGACATG GATAAATGGG ACAACACGCG CGTGCCATGG
CCAAATCATC CGGGCATCGA CATCGGCAAC AAAGGCTGA
 
Protein sequence
MLSCSKCLLP ETAEATSFDD TGSCSVCRQI EVRDTQIDWD DRHRQMMELV AQYRDKGLYD 
CIVPYSGGKD SVFQLWYVVR KLGLKPLVVR FDHWFYRPLV EENNTSVFKQ LGVDVLNFTP
NWHVVRELML ESLKRRGDFC WHCHTGIYAH TMQIAIRYET PLLFWGESLA EYQSFYSYDE
MEEVDEKRFN RAMNLGITAD DMYEFLGGRV AKRDLYPFVY PPRKELMRIK CRSICLGSYI
RWDTKKHVEI IKRELGWKGQ EVEGIPPEYD YEKIECFFQG VRDYLKYIKR GMGRTNHLAN
IDIRNHRITR EEGERLVKEY DGKRPPSLDL FLDYLQISEE QFLDVAMRHE VSPWQFSPNQ
VESGKRMPDM DKWDNTRVPW PNHPGIDIGN KG