Gene Nwi_2051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2051 
Symbol 
ID3675830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2240573 
End bp2241103 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content65% 
IMG OID637713614 
Productfec I like protein 
Protein accessionYP_318661 
Protein GI75676240 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACAG CGGCCACGAC GCAGAGCGAT GACGACCTGA TGTCGGCTTA TCTCCGGCAC 
TGGAAGGCTC TGTGCGCGCA TTTGAGGAAA CGCACCGGCT CGCAGGAACT GGCCGAGGAT
GCGCTTCAGG AAACCTGGCT GCGGCTGGCG GGGATGAAGG GTGATGCCGC CGCGATCCAG
GATCATCACG CCTTTATTCT GCGGGTCGCC GGCAATATCG CGATCGATCT TGTCCGCAGG
GAGCGGCGTC ATGCGGTTCA TTGCGTCAGC GACGAGACCC TGCTCGCGGC GGTGGCCGAT
AACATGCCGT CTCCGGAGGT CTGCGTCATC GACCGTGACC AGCTTCGCCT GCTGGCTCTG
GCGCTCGCCC GATTGCCGGC GAAGCCGCGG GCGGCGCTGC TGCTGAGCCG CTGCGACGGC
CTGTCCCATC GGGAGATCGG CGCCCGGCTG AAGGTCTCCG AGAGCATGGT CGCGAAATAT
CTCGGGCAGG CGCTGCGCCA TTGCCGCGAT CATTACCGCC ATCAGCCCTG A
 
Protein sequence
MDTAATTQSD DDLMSAYLRH WKALCAHLRK RTGSQELAED ALQETWLRLA GMKGDAAAIQ 
DHHAFILRVA GNIAIDLVRR ERRHAVHCVS DETLLAAVAD NMPSPEVCVI DRDQLRLLAL
ALARLPAKPR AALLLSRCDG LSHREIGARL KVSESMVAKY LGQALRHCRD HYRHQP