| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_1927 |
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| Symbol | smpB |
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| ID | 3676782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | - |
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| Start bp | 2111974 |
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| End bp | 2112447 |
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| Gene Length | 474 bp |
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| Protein Length | 157 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637713491 |
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| Product | SsrA-binding protein |
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| Protein accession | YP_318539 |
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| Protein GI | 75676118 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0691] tmRNA-binding protein |
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| TIGRFAM ID | [TIGR00086] SsrA-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.289169 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCGACA AAGGTGAGCG CGCCATCAAG GTCGTCGCGG AAAATCGCAA GGCGCGGTTC
AACTATGCGA TCGAGGATAC CGTCGAGGCC GGCATCGCGC TGACCGGCAC GGAGGTCAAG
TCGATCCGCA ACGGCAAGAC CACGATCGCC GAGTCCTATG CCGATTCAAA GAACGGTGAA
ATCTGGCTTA TTAATTCCAA CATCCCAGAA TATCTGCAAG CCAACCGCTT CAATCACGAG
CCCAAGCGGC CGCGCAAGCT GTTGCTGCAC AGAAAGCAGA TCAACAAGCT GATGGGCGCG
GTCGATCGTG AAGGGATGAC GCTGATTCCG CTGAAACTCT ATTTCAACGA GCGCGGCCGG
GCCAAGTTGT TGCTGGCGAT CGCGAAGGGC AAGAAACTGC ACGACAAGCG CGAGAGCGAG
AAGAAGCGAG ACTGGGGCCG CGAAAAAGGC CGGTTGCTGC GGGCGAGGGG ATAA
|
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| Protein sequence | MADKGERAIK VVAENRKARF NYAIEDTVEA GIALTGTEVK SIRNGKTTIA ESYADSKNGE
IWLINSNIPE YLQANRFNHE PKRPRKLLLH RKQINKLMGA VDREGMTLIP LKLYFNERGR
AKLLLAIAKG KKLHDKRESE KKRDWGREKG RLLRARG
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