Gene Nwi_1748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1748 
Symbol 
ID3676471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1917281 
End bp1918468 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content64% 
IMG OID637713308 
Productaminotransferase, class I and II 
Protein accessionYP_318361 
Protein GI75675940 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0902738 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.411942 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACG CGACACCGAG AGAGCGGGCC GCCAGCATCT TGGCGGCATC TAGCCGCAGC 
CAGGTTCCAC CCTTCATGGT GATGGACGTC ATGGCGGCGG CGGCGCGGAT CGAGGCGGAA
GGCGGACACG TCATTCACAT GGAGGTCGGA CAGCCTTCAG CGCCGGCGCC ACGAACCGCG
TTGAACGCGG CCCGCGCCGC GTTGGAGTCC GGACGGATCG ATTACACGCC AGCGCTGGGC
ATCCCGTCGC TGAGAGAACG GATCGCGCGA CATTACCGCG AGTTTTACGG CTGCACGGTC
AGCGCGGAGC GGATCGTCGT GACGACGGGA TCATCGGGCG GCTTCATCCT CGCGTTTCTT
TCGATGTTCG AACCGGGAGA CCGCGTCGCG GTGGCTGTGC CGGGCTATCC GCCGTACCGG
CATATCCTGA CGGCGCTCGG CTGCGAGCCG GTCCTGATCG AGACGTCAAG CGAGAACCGT
CATGCGCTGA CCGGCGAGGC GCTGTTGGCC GCGCACCGTA AGACGCCGCT GAAGGGGGTA
TTGGTCGGAA GTCCGGCAAA TCCGACGGGA ACGATGATGT CGCGCGAGGC GCTGGCGCTT
CTGATGGCGG CGGCCGATAG CGAAGGCATT CGCTTTATTT CCGATGAGAT CTATCACGGT
CTCGATTATG CGTTTCCTGC CGTCACCGCC GCTGAACTGT CGCCGCATGC GCTGATCATC
AACTCGTTTT CGAAGTATTT CTGCATGACT GGCTGGCGCG TCGGCTGGAT GGTCGTGCCT
GAACACCTCG TGCGGACGAT CGAACGGCTG CAGCAGAACC TGTCGATTTC GGTGCCGCTG
CTCTCGCAGG TCGCGGCCGA GGCGGCTTTC GCGGGCCGCG AGGAGATGGA GATCGTGAAG
CGGGGCTATG AGGAAAACCG CAACATCCTG ATCGCGGGTC TTCCTAAGGC CGGCTTGAGC
GAGTTTCTGC CAGCGGATGG CGCGTTCTAC CTCTATGCCG ACGTTTCGAA GTTCACGGCG
GACAGCCATG ATTTCGCACG CCGGATGCTG GAGCAGGCGC GCGTTGCCGC GACGCCCGGG
GTCGATTTTG ATCCCGTGCG CGGTCGCTCT TTCCTGCGCT TCTCCTATGC CCGGTCGGCC
GCCGAGATGC ACGAGGCGGT CGCGCGCATC GGGAAATGGC TGACCTGA
 
Protein sequence
MADATPRERA ASILAASSRS QVPPFMVMDV MAAAARIEAE GGHVIHMEVG QPSAPAPRTA 
LNAARAALES GRIDYTPALG IPSLRERIAR HYREFYGCTV SAERIVVTTG SSGGFILAFL
SMFEPGDRVA VAVPGYPPYR HILTALGCEP VLIETSSENR HALTGEALLA AHRKTPLKGV
LVGSPANPTG TMMSREALAL LMAAADSEGI RFISDEIYHG LDYAFPAVTA AELSPHALII
NSFSKYFCMT GWRVGWMVVP EHLVRTIERL QQNLSISVPL LSQVAAEAAF AGREEMEIVK
RGYEENRNIL IAGLPKAGLS EFLPADGAFY LYADVSKFTA DSHDFARRML EQARVAATPG
VDFDPVRGRS FLRFSYARSA AEMHEAVARI GKWLT