Gene Nwi_1472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1472 
Symbol 
ID3675561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1604767 
End bp1606380 
Gene Length1614 bp 
Protein Length537 aa 
Translation table11 
GC content58% 
IMG OID637713024 
Productphage terminase 
Protein accessionYP_318085 
Protein GI75675664 
COG category[R] General function prediction only 
COG ID[COG4626] Phage terminase-like protein, large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.528761 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.245307 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGTTC CTGCATGGAT CAATGACGGC AGTGAGATTC CCGATCCTTT TGGTTACGGC 
GAGCGCGCGG TGCAATGGCT TCGCAGGCTG AAGCATCCGA AGAATCCGGC GCGCGGTCAC
CCGTTCCAGC TTGATCCGTG GCAAGAGCGT ATCATTCGAA AGCTCTATGG CCCGCGTCAT
GAAGATGGAC GGCGCGTGGT GCGGCGGCTC GTTTTGCTAC TTCCGCGCGG CAACCGGAAA
ACGTCCCTAT GCGGCGCGAT CACGCTTTTG CACCTGATTG GCCCCGAAAG GCAACCCGGT
AACTTGGTCG TGTCGGCGGC ATCGGCTCAC GAACAGGCCA TGGAGCTATT CAACGAAGTC
GCGATGATTG TTCAGCACGA TCGACGCCTT GAGAAGCACT TGGCTGTTCG CGAATACACG
TCATCAATCA CGTTCAAGGC GCAACGATCC CGCTATATCG CTGTCGCCAG CGATGGAAAG
GTGCAACACG GCAAGACGCC GAACGTCGTC ATCGCTGACG AGCTTCACGC TTGGGAGGGC
AGGGCAGGCC GGGTGCAATG GGAGGCGCTC GATTCTGCCC TCGTAAAAGT ACCCGACACG
CTCATGATCG TTGCCACCAC GTCGGGTCGC GGACAGGAAA ACCTTGCATG GAAAACGATT
GATTACGCAA TCAAGGTTCA GAAGGGCGAG ATTGACGACC CGGCCACGTT GCCTGTTGTC
TTTATGGCTG AGGAAGGCGA CGACTGGCGC GATGAAGCGG TGTGGCACGC GCTAAATCCC
GGTATGCGCC ACGGATATCC GGACCTGACC AGCTATCGCG ACAAGGCGCA GAAGGCGATC
AACTCGCCTT CAGATCGCGA CAGCTTTCTC CAATTCAATT TGAACCGCTG GCTTGACCAC
TCGACATCGC CATTCGTGGA AATGCTTGTT TACGATCAAG GCGCCAGGGC TGTTAATCTG
GACGAACTCA AAGGCGAGTC ATGCTGGATA GGCGTCGACC TTTCCAGTAA TTCGGATCTC
ACGGCCGTCG TCGCCTGTTG GCGAGATGGC GATGATGGAT ATCAGGTTCA GCCGTGGTTC
TTCTGCCCGG AAGACAATCT GCGGCGCCGT GCGGACAAGG ATGGCGTGGC CTATCCCGCT
TGGGCCGCCG ATGGATTCAT TATCCCGACA CCCGGCAACG TCGTCGACTT CCATGTCGTT
GAAAATCATA TTCGCGATCT ATGCGACCGG TTCAACGTCC GCGAAATCGC GTTCGATCCG
CATCTGGCGC GCAACATGCT CAGTAATCTC CTGGCAGACG GCCTTCCAGC CGTGGAGATG
CGTCAGGGCT GGGTGACAAT GGCGCCCGCC ATCAAGGAAT TGGAACGGGC GATCGTCGGT
CGTCGCTTTC GTCACGGCGG ACACCCCGTG CTGCGCTGGA ACTTCGACAA CATCGCCACC
GAAACCGACA AAGCCGGCAA CAAGTCTTTT CACAAGGGCA AGTCTCGCGA CCGCATCGAC
GGCGCGGTTG CGACTGCCAT GGCTGTTGCA CGGTGCGCGG CTGGCGACAA CGCGCGATCT
ATCTACGATT CACCGAACTG GTCGCCCGAT TGGGCGTTTG TGAAGGCAGG ATAA
 
Protein sequence
MLVPAWINDG SEIPDPFGYG ERAVQWLRRL KHPKNPARGH PFQLDPWQER IIRKLYGPRH 
EDGRRVVRRL VLLLPRGNRK TSLCGAITLL HLIGPERQPG NLVVSAASAH EQAMELFNEV
AMIVQHDRRL EKHLAVREYT SSITFKAQRS RYIAVASDGK VQHGKTPNVV IADELHAWEG
RAGRVQWEAL DSALVKVPDT LMIVATTSGR GQENLAWKTI DYAIKVQKGE IDDPATLPVV
FMAEEGDDWR DEAVWHALNP GMRHGYPDLT SYRDKAQKAI NSPSDRDSFL QFNLNRWLDH
STSPFVEMLV YDQGARAVNL DELKGESCWI GVDLSSNSDL TAVVACWRDG DDGYQVQPWF
FCPEDNLRRR ADKDGVAYPA WAADGFIIPT PGNVVDFHVV ENHIRDLCDR FNVREIAFDP
HLARNMLSNL LADGLPAVEM RQGWVTMAPA IKELERAIVG RRFRHGGHPV LRWNFDNIAT
ETDKAGNKSF HKGKSRDRID GAVATAMAVA RCAAGDNARS IYDSPNWSPD WAFVKAG