| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_1394 |
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| Symbol | |
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| ID | 3677032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | + |
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| Start bp | 1519738 |
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| End bp | 1520976 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637712945 |
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| Product | pseudouridine synthase, RluD |
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| Protein accession | YP_318007 |
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| Protein GI | 75675586 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.377241 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGGC GCGACAAGCG ATCTTCTGCG GAATCCGGCA GCCGCGGGAG CGAGCGTCAT
ACAAATGCCG TGGCCAAAGC AGCCCGTCCC GGAAAAGCGG CACGTTCGAA AGGCCGTGGG
GAGGTGGAGC GATCAGCGGG CGAGCGGTGG CAGGGGGTTC GGCCTGGCAG GCCGCAGCGC
GCGGGTGCTC CCCGCAACTC CGTCCATTCC GCCGAAAAGC CCCCCGAGCC CGTGCCGGCG
CCGCTGCCGA CGAAGGTGCA GACCGTCGCG GTGACGGCGG ATGAAGCCAA CATGCGAGTC
GATCGCTTTC TTGAAGCACG CTTTCCCGGC CTGTCGTTTT CCCACATTCA GCGCGTCGTC
CGCAAAGGCG AGTTGCGCGT GAACGGCAGG CGCGCCGACA GCAAGGATCG CGTAAGCGAA
GGCGACAAGG TCCGCATTCC GCCGCTCAAG CTCGACACGC CTAAGGCTGC GGTCGGTCTC
TCGGACGCCG AGACGAAAAT CCGCGACGAA TTGCGGAAGA TGGTGCTGTT CGAGGACGCG
GACGTCATGG TGCTGAACAA GCCGGCGGGC CTTGCGGTGC AGGGCGGCTC CGGCCTGTCC
CGGCACATCG ATGGAATGCT GGAAACAATG CGCGACGCCA AAGGGCAGCG GCCGCGCCTC
GTGCATCGGC TGGATCGCGA GACGGCGGGC TGCCTGCTGA TCGCCAAGAC GCGTTTCGCC
GCCACGGCGC TGACGGGCGC GTTCCGCCAT CGTTCGGCGC GCAAGATTTA CTGGGCGCTG
GTCGCAGGGG TGCCGAAGCC GAAGCAGGGC CGCATCTCGA CCTATCTCGC CAAGGAAGAG
AATGAAGAGG AGTCGATCAT GCGGATCGCC GCGCATGGCG ACGAGGGGGC CAGTCACGCC
GTGACCTACT ATGCGGTGGT GGAGACCTCC GCCCAGAAGC TGGCGTGGGT GTCGCTGAAG
CCGGTGACGG GGCGAACGCA TCAACTGCGC GCGCACATGG CGCATATCGG TCATGCCATC
ATTGGCGATC CCAAGTATTT CAACAAGGAA AACTGGCAGT TGCCTGGAGG TCTTCAGAAT
CGTCTGCATC TGCTGGCGCG CCGTATCGTG ATTCCGCATC CGCGCGGCGG CGTTATCGAT
GCGAGCGCGC CGCTGCCGCC GCATATGCTG CAGTCCTGGA ATCTGCTCGG CCTTGAAGCG
GACCGTTTCG ATCCCATCGA AAACGCGCCG GAAGAATAG
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| Protein sequence | MSRRDKRSSA ESGSRGSERH TNAVAKAARP GKAARSKGRG EVERSAGERW QGVRPGRPQR
AGAPRNSVHS AEKPPEPVPA PLPTKVQTVA VTADEANMRV DRFLEARFPG LSFSHIQRVV
RKGELRVNGR RADSKDRVSE GDKVRIPPLK LDTPKAAVGL SDAETKIRDE LRKMVLFEDA
DVMVLNKPAG LAVQGGSGLS RHIDGMLETM RDAKGQRPRL VHRLDRETAG CLLIAKTRFA
ATALTGAFRH RSARKIYWAL VAGVPKPKQG RISTYLAKEE NEEESIMRIA AHGDEGASHA
VTYYAVVETS AQKLAWVSLK PVTGRTHQLR AHMAHIGHAI IGDPKYFNKE NWQLPGGLQN
RLHLLARRIV IPHPRGGVID ASAPLPPHML QSWNLLGLEA DRFDPIENAP EE
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