Gene Nwi_0661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0661 
Symbol 
ID3674985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp740713 
End bp741852 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content57% 
IMG OID637712212 
ProductTonB-dependent receptor 
Protein accessionYP_317279 
Protein GI75674858 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGA ACCTCCGTTC CCGTGACCCC GGAACAGTCT CAATTCATCT GACGACGGAC 
ACTTTGGGTG CTAATATCAA CAGGCTGGAT CTCCACCTGT TGAACCGAAA AAACCTGAGT
ATGTGGGTAG GATCGATGCG TAACAGCATC TTCCAATACA ACCCTGCCGA CTATCCTGCC
GGACCCTACG TTCCTAATAA CGATAACACC TACAAAATCT TACAGAAAGG CGTGTATGGA
TCGTTCGTGG CTCATGTCGC GGACCCTCTG AAGCTGATTT TCGGGGGGCG GTTGAGTTGG
TACAGTTACA ATAGTGCCAT TAATGCTGTT GACCAGAACA CGGGCGCTGT CACCTCCACA
TCGTTGACGG CATACGAAGA CAACAAGGTT TTCACGCCTT ATCTCGGCAT GGTTTACGAC
CTGACCAGTC AATGGTCGGC CTATGCCAGC TTTGCCGAGA CCTATCAGCC GCAGGCTTTC
AACTTAAGGG GGCCTCTGCC CGGCACTCCG CTTGGCCCTA TCACGGGGCG CACCTATGAG
GTCGGCGTCA AGGGCAGCCT GCTCGACGGC CGCTTGAACA CGACGTTTGC GCTATATCAT
GTGAAGCGCA ACGGTGAGGC GGTGCGGGAT TTCGCCTATC CGGCTACTCC GGGCGATCTT
GGCACAAATT GCTGCTGGCT CGGTGACGGC CGCATCGTCA GCCAGGGCGT GGATATCGAG
GTCAACGGCG AGGTCGCCGC CGGCTGGCAG GTTTCGGCCG GCTATACTTT CAACGACAAC
GAGAACATAG CGGGCGGCGG CCGCTACAAC GCGTTCACAC CGAAGCATCT GTTCAAGCTG
TGGACGAGTT ACGATCTGCA AGGGCCGCTT GAGGGCTTCA AGATCGGCGG CGGCGTGACC
GCGCAAAGCT CATTCTACCA GACCGGAACA TTCGCCGGGA ATCCGTTTAG AATTACCGAG
CCGGGCCGCG CGGTGGTGGA TCTGTTCGCG CAATACCGTC TCGATGAGCA CTGGACCCTG
GCTCTCAACG TCAACAACCT GTTCGACAGG ACATACTACC AGGCCATCGG AGCTTTCTAC
CTCGGCAATT TCTACGGCGC GCCACGTAAT TTCCTGCTGA GCGCGCGGGC GAGGTTCTAA
 
Protein sequence
MSQNLRSRDP GTVSIHLTTD TLGANINRLD LHLLNRKNLS MWVGSMRNSI FQYNPADYPA 
GPYVPNNDNT YKILQKGVYG SFVAHVADPL KLIFGGRLSW YSYNSAINAV DQNTGAVTST
SLTAYEDNKV FTPYLGMVYD LTSQWSAYAS FAETYQPQAF NLRGPLPGTP LGPITGRTYE
VGVKGSLLDG RLNTTFALYH VKRNGEAVRD FAYPATPGDL GTNCCWLGDG RIVSQGVDIE
VNGEVAAGWQ VSAGYTFNDN ENIAGGGRYN AFTPKHLFKL WTSYDLQGPL EGFKIGGGVT
AQSSFYQTGT FAGNPFRITE PGRAVVDLFA QYRLDEHWTL ALNVNNLFDR TYYQAIGAFY
LGNFYGAPRN FLLSARARF