Gene Nwi_0656 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0656 
Symbol 
ID3676232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp736051 
End bp736506 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content64% 
IMG OID637712207 
Productsigma-70 region 2 
Protein accessionYP_317274 
Protein GI75674853 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATCG TGCGCGATCC CCAGACGGCC GAGGATCTTG CGCAGGAGAC GTACCTCCGT 
GCCGCGCGGG CTGCCGAGAG CGGCCCGATC GAACATCTGG AAGCTTTTCT GTATCAGACG
GCTCGCAACC TCGCGCTCGA CCATCTGCGA CGACAGCGGA CGCGAGGCAG TGTGCAGCTT
GATGGTCTCC CCACCGCGGA AATCGAGAAA GTCCCGGCGA ATTCTCCGAC ACCGGAAGGC
GTGGTCATCG AGCGCGAGCG GTTGAACCGA TTCTGGCAGG CTTTGAGCGC GCTTCCGGAA
CGGGCGCAAA CCGTCGTCGT GCTCAGCCGC GTCGAAGGGT GGCAGAACGG ACAGATCGCC
AGTCATCTCG GCGTTTCCGA GCGCACGGTC TTCAACGACC TCAAGCTGGC GATGGCGCAT
TGCCGCGACG CGATCCGACG TCTTGATGAG GGTTGA
 
Protein sequence
MRIVRDPQTA EDLAQETYLR AARAAESGPI EHLEAFLYQT ARNLALDHLR RQRTRGSVQL 
DGLPTAEIEK VPANSPTPEG VVIERERLNR FWQALSALPE RAQTVVVLSR VEGWQNGQIA
SHLGVSERTV FNDLKLAMAH CRDAIRRLDE G