| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_0538 |
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| Symbol | |
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| ID | 3676946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | + |
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| Start bp | 602193 |
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| End bp | 604397 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637712083 |
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| Product | lipopolysaccharide biosynthesis protein |
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| Protein accession | YP_317157 |
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| Protein GI | 75674736 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3754] Lipopolysaccharide biosynthesis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.644164 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGA TTGCGGAACG CGATGTGAGA AGTGCAAAGG GGACGCGACC CGTCGCCAGT
CCTATTTCAC ATGAAGATAA TCTTCAAAGC TCGTTCCTGG ATCCGGATCT CGACGATCTG
GAGTCGGGCG CGCGCCTGCG CGGAGCGATA CTGGAGCAGT CCGGCCGGGA AATTTTCGGC
TGGATTGTCG ATGCCAGGTC GTTGGCGACA TCTGTTTCTC TTTCGCTCTT TGTCGGCTCT
CACGCCATCG AGGAGACGAG AACGGAACGC GCGGCTCCTG CGGGAGTCGG GTCGGGAATG
GCAATCGGCC GTCCCGGATT CCGGATCGAT CTGGCAAACC CTGTCGCGCG CCGCCGCCTG
GCGCGTGCGC TCGGAAACAC ATTGGCCGAT CCGGGCCAGA CCCAGGTCTA TCTTCGCGTG
CGGCTGGATG ATGGAGAGTT CTTCGAGATC CCGCTCTTCG ACGCTCTCGC CCCCGAGGAA
CTGGTCGTTG CGCTCGGATT CTCTCCCTCC GATTACACGG ACCTGCTGAT CCCGAATAAC
AACCGGCGTA TCACGCCTGA TCCGGATCCG GCCGGCAAGC AGGTGCGTCA TGTCTGTTTT
TATCTCCCCC AGTTCCACTC GTTCGAGGAG AATGACCGAT GGTGGGGACC CGGCTTTACC
GAATGGACCA ATATCTCGCG TATGCGCCCT CAGTTTCCCG CGCATGAATC TCCTTGGCTG
CCGGCGGACC TTGGCTTTTA TGACGTGAGA TTGACGGAGA CCCGCCGGCA ACAGGCCGAG
CTGGCCCGAC GCTACGGCAT TCATGGCTTC TGCTACTACG TCTACTGGTT TCAGGGCCGC
AGGCTTCTTG AAAGACCATT GGAGCTTCTC CTGGAAGATG GAGAGCCGGA CCTGCCGTTC
TGCATTTGCT GGGCGAACGA GAACTGGTCG CGTCGCTGGG ACGGTTCGGA TGCCGAGCTT
CTGCTCGGGC AGAATCACGC GCTGGAGGAT GACGTTCGCT TTATCGACGA TATGGCGCAG
CTGCTGCTCG ATGAGCGCTA TATCAAGGTC GATGGGCGCA AGATCATCCT GGTCTATCGT
CCGTCCCTGT TGCCGGACAG GCAGAGCCTG TTTGATACAT GGCGCGCTAG AGCAAAGCAG
TTAGGCATCG GCGATATTCT GATCTGCAAC GCCATGACAT TCGGGGAATT CGATCCGCGC
GACCTGAGTT GTGATGCGGC CGTGGAGTTT CCTCCGCATA CCGTCTCGAC GAGGGAGCAG
CCGCCGTCCG AGTTCGGCGC GCCGGAGAGC TTCACCGGAA AAGTTTACGA CTATGTCGAT
GCCGTGCGTT CGTCGCTGGG CAAGACCTAT GATTTTCCCT ATTTTCCGGC CGTCATGCCG
CGTTGGGACA ACACGCCTCG CAAAGGCTCA CGGGGACATG TCTTCAACAG ATCGAGTCCG
GAGGCGTTCG AGGTCTGGCT GCGGGACGCC ACGGGACGGG CAAGACGCGG TCCGTTTGCG
GAGCCGATCG TCTTCATCAA CTCCTGGAAC GAATGGGCCG AGGGGGCTCA CCTGGAGCCA
GACTCGCGAT ACGGCCGGGC ATTCCTGGAA GCGGTGAGAA GGGTGGCGTC GTCCGAGCCG
ATTTCGGCTC AGGTCCGCTC GAATCCGGAT TTGCTGGACT GCTTGAGCCG GCAGGAGCTC
GAGCAGGCGA TGAAGGAGGC ATCCACTCAC GTTCAGCTTC TTGCGAACAT TCATCGGTCG
GAGATGGTCT ATTCCGGCCT GCAGCATATG CGTGCCGGGA TGCCCGTTGA GGCCGAAGGC
GCACCGGAGA ATCCGGCCGA ATCGCTGCTG GTCATAGAGA ATATCAACTC GCAAACGAAT
GAACGGGTGG TGGTTGACCC GCGATCCGCC GTGCTCGTAC GGGGATGGGT CTGTGCGGGC
GATACCTTCG AGGCAAGCAA GCAGAGGATT GCTTTCCTCA TCCTCCTCTC CACTGATTCC
AGAAAGCAGG ACCATAATGG TTACTGTCTG GTCGTGGATT GGCATGAGCG ATTTGACGTC
AAGGAATATA TGCGGACCAG GAGCAGCGAT TGTTACTTTG GCTTCCAGCT CTCCTTTCTC
GTGCATGATC TTCCTGAAGG AGAGTATCAG ATTGCGGTTC TGGAGGTGGG TGAGGGGAAC
CGCGCGCTCA TCCGATCGAA TCATTCGATC ATTATTCGAC GTTGA
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| Protein sequence | MNKIAERDVR SAKGTRPVAS PISHEDNLQS SFLDPDLDDL ESGARLRGAI LEQSGREIFG
WIVDARSLAT SVSLSLFVGS HAIEETRTER AAPAGVGSGM AIGRPGFRID LANPVARRRL
ARALGNTLAD PGQTQVYLRV RLDDGEFFEI PLFDALAPEE LVVALGFSPS DYTDLLIPNN
NRRITPDPDP AGKQVRHVCF YLPQFHSFEE NDRWWGPGFT EWTNISRMRP QFPAHESPWL
PADLGFYDVR LTETRRQQAE LARRYGIHGF CYYVYWFQGR RLLERPLELL LEDGEPDLPF
CICWANENWS RRWDGSDAEL LLGQNHALED DVRFIDDMAQ LLLDERYIKV DGRKIILVYR
PSLLPDRQSL FDTWRARAKQ LGIGDILICN AMTFGEFDPR DLSCDAAVEF PPHTVSTREQ
PPSEFGAPES FTGKVYDYVD AVRSSLGKTY DFPYFPAVMP RWDNTPRKGS RGHVFNRSSP
EAFEVWLRDA TGRARRGPFA EPIVFINSWN EWAEGAHLEP DSRYGRAFLE AVRRVASSEP
ISAQVRSNPD LLDCLSRQEL EQAMKEASTH VQLLANIHRS EMVYSGLQHM RAGMPVEAEG
APENPAESLL VIENINSQTN ERVVVDPRSA VLVRGWVCAG DTFEASKQRI AFLILLSTDS
RKQDHNGYCL VVDWHERFDV KEYMRTRSSD CYFGFQLSFL VHDLPEGEYQ IAVLEVGEGN
RALIRSNHSI IIRR
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