Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_0206 |
Symbol | rpsA |
ID | 3676662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | - |
Start bp | 236083 |
End bp | 237786 |
Gene Length | 1704 bp |
Protein Length | 567 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637711744 |
Product | 30S ribosomal protein S1 |
Protein accession | YP_316826 |
Protein GI | 75674405 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0539] Ribosomal protein S1 |
TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.49849 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTCGA CTGATACCCT CAATCCGTCC CGTGACGATT TCGCCGCGAT GCTCGATGAG TCCTTCGCCG GTGGCAGCCT GCAGGAAAGC TCCGTCATCA AGGGCAAGGT GGTTGCGATC GAGAAGGACA TGGCCGTCAT CGACGTCGGC CTCAAGACCG AAGGCCGCGT GGCGTTGCGT GAATTCTCCG GTCCAGGTCG CGAGAGCACG CTGAAGGTCG GCGACGAGGT TGAGGTGTTC CTTGATCGCA TCGAGAACGC GCTCGGCGAG GCCGTGCTGT CGCGCGACAA GGCGCGCCGC GAGGAAAGTT GGGGCAAGCT CGAGAAAGCC TTCAACAACA ACGAGAAGGT GCACGGCGTC ATCTTCAATC AGGTCAAGGG CGGCTTCACC GTCGATCTCG ACGGCGCCGT CGCCTTCCTG CCGCGCTCGC AGGTGGACAT CCGTCCCATT CGCGATGTCG GTCCGCTGAT GAACAACACC CAGCCGTTCC AGATTCTCAA GATGGATCGC CGCCGCGGCA ACATCGTCGT CTCCCGCCGC ACGGTGCTGG AGGAGACCCG CGCCGAACAG CGGCAGGAGT TGGTCCAGAA CCTCGAAGAG GGTCAGGTCA TCGACGGCGT GGTCAAGAAC ATCACCGACT ACGGCGCGTT CGTCGATCTC GGAGGCATCG ACGGCCTGCT GCACGTTACC GATATCGCCT GGCGCCGCGT CAACCATCCG ACCGAAGTGC TGGCGATCGG CCAGACCGTG AAGGTCAAGA TCATCAAGAT CAATCACGAG ACCCACCGCA TCTCGCTCGG CATGAAGCAG TTGCTGGATG ATCCCTGGCA GGGCATCGAG GCCAAGTATC CGCTGGGCGC CCGCTTCACC GGCCGCGTCA CCAACATCAC CGACTACGGC GCGTTCGTGG AGCTTGAGCC GGGCATCGAG GGCCTTATCC ACGTCTCGGA AATGTCCTGG ACCAAGAAGA ACATGCATCC GGGCAAGATC GTCTCGACCT CGCAGGAAGT CGAGGTGCAG GTGCTCGAGG TCGACAGCGT CAAGCGCCGC ATCTCGCTCG GCCTCAAGCA GACCATGCGC AATCCCTGGG AGGCGTTCAT CGAGAAGCAC CCGGTCGGTT CGACCGTGGA GGGCGAGGTC AAGAACAAGA CCGAGTTCGG ACTGTTCCTG GGCCTGGAGG GCGATGTCGA CGGCATGGTC CACCTTTCCG ACCTCGACTG GAAGCAGCCG GGCGAGCAGG TCATCGACAA TTTCAAGCGC GGCGACATGG TCAAGGCCGT CGTGCTCGAC GTCGATGTCG AGAAGGAACG CATCTCGCTC GGCGTCAAGC AGCTCGAGGG CGACCCGTTC GCCGAACCGG GCGACGTCAA GAAGGGCGCG GTCGTCACCT GCGAGGTGCT CGAGGTCAAG GACGGAGGCA TCGAGGTGCA GATTTCCGGC ACCGAGTTCC AGACCTTCAT CAAGCGTTCG GAACTGGCGA GGGACCGCAA CGATCAGCGC ACCGAGCGTT TCGCCGTCGG CGAGAAGGTC GATGCCCGCG TCATCCAGTT CGACAAGAAG GCCCGCAAGG TGCAGGTCTC GATCAAGGCG CTCGAAGTGG CCGAGGAGAA GGAAGCCATC GCGCAGTACG GTTCTTCCGA CTCGGGCGCA ACGCTGGGCG ATATCCTCGG CACCGTGCTG AAACAGCGCA CCGACAACAA GTAA
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Protein sequence | MASTDTLNPS RDDFAAMLDE SFAGGSLQES SVIKGKVVAI EKDMAVIDVG LKTEGRVALR EFSGPGREST LKVGDEVEVF LDRIENALGE AVLSRDKARR EESWGKLEKA FNNNEKVHGV IFNQVKGGFT VDLDGAVAFL PRSQVDIRPI RDVGPLMNNT QPFQILKMDR RRGNIVVSRR TVLEETRAEQ RQELVQNLEE GQVIDGVVKN ITDYGAFVDL GGIDGLLHVT DIAWRRVNHP TEVLAIGQTV KVKIIKINHE THRISLGMKQ LLDDPWQGIE AKYPLGARFT GRVTNITDYG AFVELEPGIE GLIHVSEMSW TKKNMHPGKI VSTSQEVEVQ VLEVDSVKRR ISLGLKQTMR NPWEAFIEKH PVGSTVEGEV KNKTEFGLFL GLEGDVDGMV HLSDLDWKQP GEQVIDNFKR GDMVKAVVLD VDVEKERISL GVKQLEGDPF AEPGDVKKGA VVTCEVLEVK DGGIEVQISG TEFQTFIKRS ELARDRNDQR TERFAVGEKV DARVIQFDKK ARKVQVSIKA LEVAEEKEAI AQYGSSDSGA TLGDILGTVL KQRTDNK
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