Gene Nther_2393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2393 
Symbol 
ID6317009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2557444 
End bp2558652 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content42% 
IMG OID642644781 
Productpeptidase dimerisation domain protein 
Protein accessionYP_001918546 
Protein GI188587001 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000137501 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGATT TTGAGCTTTA TAAGATTTTA CAAAATAAGA ATGTAGCTAG AGCTTTAAAG 
TTCATTGAAA AAGATGCTAA AAGAACTTTA GAAGAACAGA CACAACTTTG TGAGATACCT
GCACCAACTT TTGAAGAAGA AAAACGCGGT AAATATTATT ATCAGCTTAT GTCCCAGTTA
GGCTTAGACG AAGTTAAAAT AGACGAATAT AATAATGTGA TTGGAATTTT AAAAGGAAGA
CAGGAACAAC CTGGAATTAT AACTATGGCT CACTTAGACA CGGTTTTTCC CCAGGAAACT
GATGTATCAG TCAAAAATAT AGATGGAATT TTGTATGCTC CAGGAATCTC AGATAATTGT
AGAAACCTGG CAGCCCAGTT ATCAATTATC AGGGCTTTTA AAGAAGCAGG TATCAGGCCG
GAAACAGATA TCATATTTGT GGGAAATGTT TGTGAAGAAG GATTAGGAGA TTTAAAGGGT
TCAAAAGTTA TCATGGAATC ATATCCCCAG GTCCAGGGTG TGGTGGCCCT AGATGGAACT
GGCATGGGTA CTGGCAGTAT AGTCTATGGA GCCACTGGAA GTAAAAGATA TGAGGTGACT
TTTATGGGAC CTGGGGGGCA CAGTTTTGGT GCATTTGGAG AACCTAGTGC CATTCATGCC
CTGGGTAGGG CTATTTCAAA AATTTCAAGC TTGGAGGTTC CCCAAGAGCC TAAGACCACT
TTTAATGTGG GGACTATCTC AGGTGGCACC TCAGTGAATA CTATCGCAGC AGAAGCTTCC
ATGCTGGTAG ATTTGCGGTC CAATGGGGAA CAAGAACTGG CCGATTTAGA ACGAGAGGTC
TTGGAAATAA TTCAAAAATC CAAAGAAGAA GAAAATGCCC GCATTAAAAA GGATGACCAA
GAAAACCAGT TGAAAGTGGA AAACAAATTG GTCGGTGACC GCCCTGCTGG GATGCAAGAT
CCCAACATTC TCATTGTTCG AGCAGCTGTG GCGGCAACTA GCGCTCTGGA AATAGAACCA
CGTCTTACTG GAGCGGGTAG TACTGATGCC AATATTCCAA TAAGCATGGG TATCCCCGCT
GTTTGTCTTT CAGGAGGCGG ACAGGGTGGG AGTGCTCACA CCCTGGAAGA GTGGTTTGAT
CCCACAAATG CTCATATAGG CGTACAGAGG GTATTTTTGC TATTGGTTTA TTTGAGTAAT
GCCACCTAA
 
Protein sequence
MIDFELYKIL QNKNVARALK FIEKDAKRTL EEQTQLCEIP APTFEEEKRG KYYYQLMSQL 
GLDEVKIDEY NNVIGILKGR QEQPGIITMA HLDTVFPQET DVSVKNIDGI LYAPGISDNC
RNLAAQLSII RAFKEAGIRP ETDIIFVGNV CEEGLGDLKG SKVIMESYPQ VQGVVALDGT
GMGTGSIVYG ATGSKRYEVT FMGPGGHSFG AFGEPSAIHA LGRAISKISS LEVPQEPKTT
FNVGTISGGT SVNTIAAEAS MLVDLRSNGE QELADLEREV LEIIQKSKEE ENARIKKDDQ
ENQLKVENKL VGDRPAGMQD PNILIVRAAV AATSALEIEP RLTGAGSTDA NIPISMGIPA
VCLSGGGQGG SAHTLEEWFD PTNAHIGVQR VFLLLVYLSN AT