Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_2358 |
Symbol | |
ID | 6316775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | - |
Start bp | 2509927 |
End bp | 2511330 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 642644746 |
Product | MATE efflux family protein |
Protein accession | YP_001918511 |
Protein GI | 188586966 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 79 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCCTG AAGAAAAGCA AAGCAGTCCC GGTAATAGTT TAGAAGGGAG AATTGCCCCT GACAGAGAAA ATATCTTAAG AAACCTGTGG AAACTCAGTT GGCCGGTAAT GTTGGGGATG ATGCTTCACT CCACCCTGGC AGTAGCCGAT ACTTTTTTCG TAGGTCGTTT GGGGGATTAT GCCGTTGCAG CTATTTCCTT GTCGGGCAAT ATCTTTTGGC TATTGATCAC AATATCTGAA GTCATTAATG TAGGTACAGT ATCCATGGTA GCAAGATTTA TCGGTGCCGA AGAACCAGGA AAGGTTAAAA ATACCATTCT CCATTCAGGA CTGTTTGCCT TGTTGTTATC TCTGTTGGTA TCTTCTTTGT TAATCTACTT TTCGGCACCT TTTTTGAGTT TATTTACTCA AGATGAACAG ATCCTGGCTT CTGGAACTGC CTATCTTAGA ATCATGGCTG TGGGTATGTT CATTCTATTT TTGTATATTG TTATGAGTGC ATCGTTTCAG GGTGCTGGAG ATACTAAGAC ACCAATGAAG ATGCTATTTT TTGCCAATGG CTTAAATATT ATTCTTAATC CAGTTTTTAT CCTGGGCCTG GGTCCTGCCC CGCGCTTAGA AGTCATGGGA GCCGGGGTAG CTACTTTGGT CTCCAATTCC CTGGCCCTGT TAATATTGGG GCGTTGGTTT TTCCGGACCA ATAAGTTGCC GGCTATTAAG GTAAGTGATT TTCAGTTTAA TAGGTCTATA GCAAGAAATA TCATGGCTAT CGGATTTCCG GCTGGAGTTC AAGCCATATC CAGACCATTG ACGGGTATGA TATTAATGTA CATGGTCTCT ATCTTTGGTG ATGATGCCAT TGCAGCTTTT GGCGTGGGTC AACGGGCCCT GTCTTATGCT TTTATAGTAT CAGCAGGTCT AATGGTGGCC ACTACTACCA TGGTAGGACA GGGACTAGGT ACAGGAGATC TGGACTATAC TAGAAGTATA TCTAGAAAAA GTATTATAAT CGGATTTTTA TTTCAAGGTG CTATAGCTTT GGTTTACTTT GTCCTGGCAC GGCCGATTAT GGATTTATTT ATTACTGAAT CCCAATTGGC TGTAGAGATG GGTGTCAACT ATCTGCGAAT TATTGCCCTG GGCCTTTTAT TTGCAGGTCC AATCCGGGCT TTTGTAGGGA CTTTTAAAGG AGCAGGTGAC ACGGTTCCGG GTATGGTGGC CGCCTTTATA TCTAATTGGA TAGTCAAACT TTCTCTGGCT TATCTAATGG CTTTCCATAT GGAAATAGGA ACTAATGGTA TCTGGTGGGC TATTACTATT TCTATTGGAA TAGAGATAGC AATTTTATAT TACTGGTACC AAAAGGGGAC CTGGCTGTAT CGCAAGATAC AGGTTCAGGA ATAG
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Protein sequence | MEPEEKQSSP GNSLEGRIAP DRENILRNLW KLSWPVMLGM MLHSTLAVAD TFFVGRLGDY AVAAISLSGN IFWLLITISE VINVGTVSMV ARFIGAEEPG KVKNTILHSG LFALLLSLLV SSLLIYFSAP FLSLFTQDEQ ILASGTAYLR IMAVGMFILF LYIVMSASFQ GAGDTKTPMK MLFFANGLNI ILNPVFILGL GPAPRLEVMG AGVATLVSNS LALLILGRWF FRTNKLPAIK VSDFQFNRSI ARNIMAIGFP AGVQAISRPL TGMILMYMVS IFGDDAIAAF GVGQRALSYA FIVSAGLMVA TTTMVGQGLG TGDLDYTRSI SRKSIIIGFL FQGAIALVYF VLARPIMDLF ITESQLAVEM GVNYLRIIAL GLLFAGPIRA FVGTFKGAGD TVPGMVAAFI SNWIVKLSLA YLMAFHMEIG TNGIWWAITI SIGIEIAILY YWYQKGTWLY RKIQVQE
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