Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_1965 |
Symbol | |
ID | 6315912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | - |
Start bp | 2071676 |
End bp | 2072359 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 642644355 |
Product | Spermine synthase |
Protein accession | YP_001918123 |
Protein GI | 188586578 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0421] Spermidine synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000000563558 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 0.560071 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTATCCG AAACTATAAC AGCTGTTAAA AATGATGAAA AAGAACTTAA ATTAATAAAA AGGGGTCAAC ATTATGAGAT TATCTCTAAT GGCATTTTTT TAATGGCTAC TTATGGAGGA AACAGTGAGC GGGAAATGGT TGAAGATGGT TTATTTTATG TGAGTCAATT TAAGTTGAAG GATATAAAAG TCTTAATTGC AGGACTTGGT GTGGGTTATT CATTAATTCC GGCGGTAAAA GACGACAGGG TTTCCAAGTT AGATGTAGTT GAGATGGAAC AAGAGATCAT AGATTGGAAT AAAAAATACT TCTCAAAATA TAATGAAAAT TGCTTGGAAA ATGAAAAGGT AACAGTGATC CAGGATGATA TTTATAACTA TCTTAAAAAT AACGCAGAGT TGGGCCATGA TTACTACGAT TTGATCATTT TGGATGTTGA CAATGGTCCG GACTGGCTTG TAAGAGAAGA TAATAAACGA TTATATCAAA AACAGGGAAT GGAATTAGTA AGTAAGTCAT TAAATCAAGG TGGTTATGTT GCAATTTGGT CAATGGAAGA AAAAAGTAGC TTAGAAAATT CTTTATTGGC ATGTTACTCG CAAGTTTTTA TCAGAGAATA TTTGTCCTAT GATGATAAAG GTAGGAAACA TAAAGATTCT GTTTATTTTG CTCAAAAAAA CTAA
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Protein sequence | MVSETITAVK NDEKELKLIK RGQHYEIISN GIFLMATYGG NSEREMVEDG LFYVSQFKLK DIKVLIAGLG VGYSLIPAVK DDRVSKLDVV EMEQEIIDWN KKYFSKYNEN CLENEKVTVI QDDIYNYLKN NAELGHDYYD LIILDVDNGP DWLVREDNKR LYQKQGMELV SKSLNQGGYV AIWSMEEKSS LENSLLACYS QVFIREYLSY DDKGRKHKDS VYFAQKN
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