| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1489 |
|---|
| Symbol | |
|---|
| ID | 6314825 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | + |
|---|
| Start bp | 1560580 |
|---|
| End bp | 1562136 |
|---|
| Gene Length | 1557 bp |
|---|
| Protein Length | 518 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 642643869 |
|---|
| Product | carboxyl transferase |
|---|
| Protein accession | YP_001917660 |
|---|
| Protein GI | 188586115 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) |
|---|
| TIGRFAM ID | [TIGR01117] methylmalonyl-CoA decarboxylase alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.810044 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.0441726 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACTA ATGATAAAGA CAAATTGGAA ATGTTACAGG AAGAAAAAGA AAAGATATCT
AAAGGCGGAG GAGAAAAACG GATCGCTAAA CAGCATGAAA AAGGAAAATT AACAGCTCGA
GAGCGCATAG AAAACTTTCT AGATAATGGA AGTTTTGTCG AATTGAACGC CTTTGTCAAG
CATCGACAAA CCCAATTGGG AATGGACAAA AAAGAAGCTC CTGGTGAAGG AGTTGTTACT
GGATACGGAA CTGTAGATGG GCGTTTAGTC TACGTTTTTG CTCAAGACTT TACAGTTCTT
GGTGGAACTT TGGGTGAAAT GCATGCGTAT AAAATATGTG ATGCCATGGA TCGGGCTGCT
AAAGTAGGTG CTCCTTTCAT CGGTTTAAAT GATTCTGGAG GGGCCCGTAT TCAAGAAGGG
GTAGATGCGC TTAAAGGTTA TGGCAATATT TTCTACCGAA ACACTATTTA TTCCGGAGTT
ATACCGCAAA TTTCCGCAAT TATGGGTCCT TGTGCTGGAG GGGCTGTATA CTCACCAGCC
TTGACAGACT TTGTGTTTAT GGTAAGAGAC ACCAGTCAAA TGTTTATTAC AGGCCCCCAA
GTAATTAAAA CAGTTACTGG TGAAGAGGTG TCTTTTGAAG AGCTAGGCGG TGCCGATACC
CATAATTCAA AAAGCGGTGT GGGTCATTTT GCTGCTGATA ATGATGAAGA CTGTCTGGCA
CAAATCCGGG AATTGCTTAG CTTTATTCCA TCAAATAATG CTGAAGATCC ACCAGCTGTG
GAGCCTAGTG ATGATCCCAA CCGCAAAGAA GAAGATTTAA AAGATATAAT CCCGGAAAAT
CCTAATAAAC CTTATGATGT ACGAGACGTT ATTACCAGAA TTACAGATGA TGGCTATTTC
TTTGAAATTC AAGAAAGTTA TGCCCAAAAC ATAATAATTG GATTTTCGCG TTTGAATGGC
CGGACGGTAG GTATTATAGC AAATCAACCT GCTCATCTGG CTGGTTGTTT GGATATTAAT
GCCTCGGACA AAGCATCCAG ATTTATCCGT TTCTGTGACT CCTTTAATAT CCCTATTGTA
ACTTTCCAAG ATGTACCGGG TTATTTACCG GGAACGGATC AAGAGCATGG TGGTATTATT
CGCCATGGTG CCAAACTATT GTATGCCTAT TCTGAAGCTA CTGTTCCTAA GATTACTGTC
ATTCTTAGAA AATCCTATGG TGGCTCTTAC TTAGCCATGT GTTCTAAATC ATTACAGGCA
GATGTAGTTT ATGCCTATCC CAGTGCCGAA ATTGCTGTTA TGGGACCTGA AGGGGCTGCA
AATATAATTT TCAAAAAAGA TATTGAAAAC TCCGATGATC CAGAAAATAC TCGACAAGAA
AAGATTTCCG AATATCGGGA ACAGTTTGCT AATCCTTATG TAGCTGCATC AAGAGGTAGG
GTTGATGATA TTATTGATCC AAAAGAAACC CGACCTAGAT TAATCTATGC CCTAGAAACA
TTACAAACCA AGAGAGAGCA ACGGCCATCT AAAAAACATG GAAATATCCC TGTTTAA
|
|---|
| Protein sequence | MATNDKDKLE MLQEEKEKIS KGGGEKRIAK QHEKGKLTAR ERIENFLDNG SFVELNAFVK
HRQTQLGMDK KEAPGEGVVT GYGTVDGRLV YVFAQDFTVL GGTLGEMHAY KICDAMDRAA
KVGAPFIGLN DSGGARIQEG VDALKGYGNI FYRNTIYSGV IPQISAIMGP CAGGAVYSPA
LTDFVFMVRD TSQMFITGPQ VIKTVTGEEV SFEELGGADT HNSKSGVGHF AADNDEDCLA
QIRELLSFIP SNNAEDPPAV EPSDDPNRKE EDLKDIIPEN PNKPYDVRDV ITRITDDGYF
FEIQESYAQN IIIGFSRLNG RTVGIIANQP AHLAGCLDIN ASDKASRFIR FCDSFNIPIV
TFQDVPGYLP GTDQEHGGII RHGAKLLYAY SEATVPKITV ILRKSYGGSY LAMCSKSLQA
DVVYAYPSAE IAVMGPEGAA NIIFKKDIEN SDDPENTRQE KISEYREQFA NPYVAASRGR
VDDIIDPKET RPRLIYALET LQTKREQRPS KKHGNIPV
|
|---|
| |