| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1383 |
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| Symbol | |
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| ID | 6316636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | + |
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| Start bp | 1455451 |
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| End bp | 1456350 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 642643763 |
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| Product | integrase family protein |
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| Protein accession | YP_001917554 |
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| Protein GI | 188586009 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00162011 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.640047 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGAAACG AGTTGCTCGA CTTTTTGGAA TTTTTAAAAG GAGAAAAGAA TTTATCCCAT
TATACCGTAG ACAATTACTA TAAAGACCTT ACTCAGGCAG AAAACTTTTT TAATGAACAA
TTTGAGCTAT ATCAATGGGA TGAAGTGACA CATAAACATA TTAGACATTT TCTTGCCTAT
TTAAAAGATA AAAACTACGA AAAAAGCACA ACGGCTAGAA AGTTGTCAGC TATTAGGTCA
TTGTTCAAAT TTTTAACCAG GGAAGAAAAA ATAAGGTCTA ACACTAGCGC TTTATTAGCC
ACACCAAAAA AAGAGCGCAA ACTACCGGAG TTTTTGTCAA TAGAAGAAGT TGAAATGTTG
ATAAATGCCC CAGGTGATGA TCCTTTTGGA CTCCGTGATA AGGCAATCTT GGAGGTTTTT
TATTGTTCAG GCATAAGGCT AGGAGAATTA TGGGGCCTTG ATTTACAAAA TTTAGATTTA
CAAACTGGTT ACTTAAAAGT GACTGGAAAA GGCAATATTG AGCGGTTGGC ACCCTTGGGA
AGCTTTGCCT TGGCAGCTAT AGAAGATTAT CTTTATAATG CCAGGCCTGA ATTACTTAAA
AAGAATAAGT CAGTTGAAAA CTGTGATGCC TTATTCTTGA ATAAATTTGG AACAAGGATA
TCTCAGCGCA GTATTAGGAG AAGGGTAAAA AAATACGTCC AACAAACTGC CTCAGAACAT
AGAGTTTCTC CTCATAGTTT AAGACATAGT TTTGCAACCC ATTTACTAGA AGGTGGTGCC
GATCTCAGGG CTGTTCAAGA ATTACTGGGA CATGTGAATA TATCTACGAC TCAAATTTAT
ACCCATGTTA ATCAAGCCAG GATGACGGAG GTTTACAATA AATATCATCC CAGGGCTTAA
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| Protein sequence | MRNELLDFLE FLKGEKNLSH YTVDNYYKDL TQAENFFNEQ FELYQWDEVT HKHIRHFLAY
LKDKNYEKST TARKLSAIRS LFKFLTREEK IRSNTSALLA TPKKERKLPE FLSIEEVEML
INAPGDDPFG LRDKAILEVF YCSGIRLGEL WGLDLQNLDL QTGYLKVTGK GNIERLAPLG
SFALAAIEDY LYNARPELLK KNKSVENCDA LFLNKFGTRI SQRSIRRRVK KYVQQTASEH
RVSPHSLRHS FATHLLEGGA DLRAVQELLG HVNISTTQIY THVNQARMTE VYNKYHPRA
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