Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_0916 |
Symbol | |
ID | 6314575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | + |
Start bp | 971458 |
End bp | 972162 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 642643289 |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_001917089 |
Protein GI | 188585544 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0276045 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 9.727110000000001e-18 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTGAGA ACACCAATTG TTACACTGTG TTAATCATAG AAGATGAACA GGGACTTGTG AAAGTTTTGA AAGCCTATTT GGAGAAAGAA GGATACCAGG TCTATGCCTC TCACGATGGT TTAGCAGGAT TAGAACTTTT TAAAAAACAA AATCCTGACA TTGTGGTTTT AGATTTAATG CTTCCCAACA TGTCAGGAGA AGAAATAGCC AGAAAAATCA GAAAAGAGCA AGAGACTCCA ATTCTCATGT TAACTGCCAA GGGCAGTGAA GATGAGAAAA TTACAGGTTT GGGAATAGGT GCAGATGATT ATGTAGTAAA GCCTGCCAGC CCAAGGGAAA TAATAGCCAG GTTAAAGACA ATTTTGCGAA GAGTAGGAAA AGAGCCTGGC AGAATACAAC AAGAAATTAT TACAGCAGGT GAAATCACCA TTGATACTTT GGCTAAAAAA ATTTATTTGC GAGGAACAGA GATTTCTTTA ACTCAAACGG AATTTGATAT TTTATCAACC CTGGCACTAT ATCCTAAAAA AGTGTTTTCT CGCGAAAACT TGGCTGATAG AATATACGGT TATTTATGGG AAGGGGACTC CCGTACGATA GATACCCATA TCAAGAATTT GCGAAGAAAA ATTGAACAAA ATCCTAAAAA ACCTATTTTT ATAAAAACTG TGTTTGGTGC CGGTTATCAA TTTGGTAAAT TTTAA
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Protein sequence | MSENTNCYTV LIIEDEQGLV KVLKAYLEKE GYQVYASHDG LAGLELFKKQ NPDIVVLDLM LPNMSGEEIA RKIRKEQETP ILMLTAKGSE DEKITGLGIG ADDYVVKPAS PREIIARLKT ILRRVGKEPG RIQQEIITAG EITIDTLAKK IYLRGTEISL TQTEFDILST LALYPKKVFS RENLADRIYG YLWEGDSRTI DTHIKNLRRK IEQNPKKPIF IKTVFGAGYQ FGKF
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