Gene Nther_0901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0901 
Symbol 
ID6314887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp951449 
End bp952471 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content40% 
IMG OID642643274 
Productcopper amine oxidase domain protein 
Protein accessionYP_001917074 
Protein GI188585529 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.948767 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.18587 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGAAGA AAACTATTAA ATCTACTTTA GCGATCTTTG CTCTGTCGGG AGCTGTTTTA 
TTTAATGCCG GCTTTGCCAA TGCTCAGGAT TCTTTCTCGG TCCAGGTAAA TGATGAAGAA
GTGCGGTTTG TTGATCAGCA ACCTTTTATC GATGAAAATA ATCGAACTTT AGTACCTGTA
CGGTTTGTTA GTGAGGCATT AGGAGCAAGG GTCGATTGGA ATGGAGACAA AGGTGACCAA
GGCCAAGTAC ATATAAAAAG AGACGATACC CAATTAATAA TTGAGATTGG GGAATCACAC
TTTTATCATG ACCAGGAAAA AGTTGCAATA GACACAGAAG CTAAAATCAC TAATCAAAAC
AGAACTGTCT TACCAGTCAG AGCATTATCA GAAGCTTTGG GAGCTGATGT AAGCTGGGAA
GATGATACTG TATCGATAGA GGATACGAGC TTGGCCACGG AAGATATCGA GACAAAAGAA
GATGATACTA CTCGAGATAA TATGGAGGAA AGTGTAGAAG GACAAGAAAC CGAAATTGGC
GCTAAATCTG AAAAAGTCAC TCAAGTTAAT GAGGCTATTA CTAGTCATGG GTATGATGCC
TTGGAAGAAG ATGCAGTAGA GAAGCTAATC AAGCAATCGG AACAGTTGGA CTTGGATTTG
AGCTTGCTAC TGGGTCTGAT GAGAGTTGAG AGTACTTTTA ATCCAGAGAA TGTGGGTAGT
GCATCAGGGG CTTTAGGATT ATTCCAAATA ATGCCCGGAA CAGCTTCAAA TCTTGCTAGT
CAGCACGGAT GGGAATATGA ACGGGAAAAA CTTTTTGATG CTCAATACAA TATCAAGCTT
GGTACTACTT ACTTGCATCA ATTAATGGAA AAGTACGATG GTAATGTACA CAAGGCTCTA
TCCGGATATA ACCGAGGTAC AGTAGGTTTA CAGAACTATA TGGATGTCCA TGGGACTCCT
GTAAGTGATT TTTCTCAAAT GGTGTTGGAT AAAGCTGATA AATATGGTCA GAACTTAAAT
TAA
 
Protein sequence
MRKKTIKSTL AIFALSGAVL FNAGFANAQD SFSVQVNDEE VRFVDQQPFI DENNRTLVPV 
RFVSEALGAR VDWNGDKGDQ GQVHIKRDDT QLIIEIGESH FYHDQEKVAI DTEAKITNQN
RTVLPVRALS EALGADVSWE DDTVSIEDTS LATEDIETKE DDTTRDNMEE SVEGQETEIG
AKSEKVTQVN EAITSHGYDA LEEDAVEKLI KQSEQLDLDL SLLLGLMRVE STFNPENVGS
ASGALGLFQI MPGTASNLAS QHGWEYEREK LFDAQYNIKL GTTYLHQLME KYDGNVHKAL
SGYNRGTVGL QNYMDVHGTP VSDFSQMVLD KADKYGQNLN