Gene Nther_0723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0723 
Symbol 
ID6315694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp747252 
End bp748787 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content37% 
IMG OID642643101 
Productbeta-lactamase 
Protein accessionYP_001916901 
Protein GI188585356 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000618645 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAAACA AATTGTTGCC ACTAACTCTG GCATTTGCTC TTATTATTTC ATTTATTGGG 
TATCATGAAG AGAATATTTC CAAAGCCCTG GGTTTTGATG TACAATGGAA TCAAAAAGCT
CATGAAATAA AAACAAAAAT CGTTGACCAG AACAAGGAAG TGAATTATTC AGTAGGTGGT
GAACAAGAAA TGAATGCAGT TTTACAAAAA CAGCTTGAAG ATATAGTTGA AGAGTATGAA
TTAGCTGGTG TGCAAGTTGC CGCCGTCAAT GAGAAAGGCA CTATCGTCTC CGGCAATGCA
GGAAAACATA GCCTGGAAGA TAAAACAGAG ATTGACGATA ATACTATCTT GAGGAGTGCT
TCTGTTTCAA AAGCTTTTAC GGCAGTTGCC ACTATGCAGC TTGTTGAACA GCAACAAATT
GATTTGGATG CTGATATAAA TGACTATCTT GAACTGGAAG TTGATATCAA ACACCCTGAA
TATCCTGACA CTAATATAAC TCCCAGAATG TTACTAAACC ACAGTTCTGG CATGACTAAC
GGTACTTACG TTAGTTTTGC ATCGAATTCT ATAAATCGCG GCAATCGCCA AAAAACGCCC
CCTTCCCTTT CAGAAGTTTT TGATGAAGAA GGTGAATTTT ATTCAAATTC CATCTGGTCA
GAATATAAAC CGGGGGAGAA ATTTATATAT ACTAATTTAG GTTATATAGT CTTAGGAGCA
ATTGTTGAAA ATGTGTCAGG AATGAATTTT GATGAGTATA CTAATGAAAA TATTTTCAAT
CCTTTGGGGA TGAATTCTTC AAGTTTTAAT ATTAATGACC TGAGAAATTC TAGAAGAGGC
CGAGATCGAG ATAGGATAGC TCCTCTATAT CGAAGGACAG TAGAATATAT AGATCAGGAA
GAATCCGTTG AATCCAAAAA AAGCACAATC AAAGATAATG AAAAAACACT AGAGAATAAA
GATCAGCAAC ATAACAGGCA AAGACAAGTT CATTTTAGAG GAACAAATTT TGGTGACCTG
CCGGAGTTTT CCAATTATAG GCCTGGTAGA AACGGTTCAC TGTATTCACC CCAGGGGGGG
TTATTTACTA CCGCCACGGA CCTGGCTAAG TTTGCATCGG CTATGATAAA TGGAGGAGAA
TATCAAGGAA ATAGAATTTT AGAACAAGAA ACCATTGAAT TGATGAAACA AGTCAGTGTC
AGCTCCTGTG CCCAAGATTG GACAGATTTT GATGGTCTTT TTAAGAAGCA GGGGTTAGGT
CTTCATATCA CCGATGAGTT GTTAGAAGAT GGAATAACAC TTTATGGCCA TCCGGGAATT
GCTTATGGAT TATTAAGTGG TGTTTATTTC ACAGATCATA CAGAGCAGAC GGAGCAATCG
AGACGGGAAA ATAATTTCGG CATCGTATAT CTGATCAATG GAGCCAATAC AGAAATTCCC
GGTTCTAGTG ATACTTTTTA TGAAATTGAA GAAGAAATTG CAAAAACAGT ATATGATTCT
CTCTATGATT CCATTAAAAA AGCTGGAGAA CATTAA
 
Protein sequence
MKNKLLPLTL AFALIISFIG YHEENISKAL GFDVQWNQKA HEIKTKIVDQ NKEVNYSVGG 
EQEMNAVLQK QLEDIVEEYE LAGVQVAAVN EKGTIVSGNA GKHSLEDKTE IDDNTILRSA
SVSKAFTAVA TMQLVEQQQI DLDADINDYL ELEVDIKHPE YPDTNITPRM LLNHSSGMTN
GTYVSFASNS INRGNRQKTP PSLSEVFDEE GEFYSNSIWS EYKPGEKFIY TNLGYIVLGA
IVENVSGMNF DEYTNENIFN PLGMNSSSFN INDLRNSRRG RDRDRIAPLY RRTVEYIDQE
ESVESKKSTI KDNEKTLENK DQQHNRQRQV HFRGTNFGDL PEFSNYRPGR NGSLYSPQGG
LFTTATDLAK FASAMINGGE YQGNRILEQE TIELMKQVSV SSCAQDWTDF DGLFKKQGLG
LHITDELLED GITLYGHPGI AYGLLSGVYF TDHTEQTEQS RRENNFGIVY LINGANTEIP
GSSDTFYEIE EEIAKTVYDS LYDSIKKAGE H