Gene Nther_0209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0209 
Symbol 
ID6315956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp226834 
End bp227370 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content39% 
IMG OID642642592 
ProductLSU ribosomal protein L6P 
Protein accessionYP_001916396 
Protein GI188584851 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0097] Ribosomal protein L6P/L9E 
TIGRFAM ID[TIGR03654] ribosomal protein L6, bacterial type 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.077075 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.533407 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGGA TTGGTAAAAA GCCTATAGAA ATACCTGATA GCGTTGATAT CAGTATAAAC 
AATAATGAAG TTACAGTAAA AGGGCCCAAG GGTGAGTTGA GCCAAGTTGT TGACCAGTCA
ATTATCCTAG AAGAAGAGGA AGGACAATTG TTAGTCAAAA GGCCAACGGA CAGTAACCAT
CATAAATCCC TTCATGGTCT ATCCAGAAGT TTAATTGCCA ATATGGTTGA AGGTGTAACC
AATGGCTTTG AAAGACATTT GGAAATAGTC GGGGTTGGTT ATCGAGCGCA GATGCAAGGG
AAAAACCTTG TATTAAATGT AGGTTACTCA CACCCTGTTA CAATAGAACC ACCTGAAGGT
GTGGAGATTG AAGTACCCAA AAACAACCAA ATTATTGTAA AAGGTACTGA TAAAGAAGTT
GTTGGACAGG TGGCTGCAAG AATTAGAGCT GTACGCAAAC CTGAACCTTA TAAAGGTAAA
GGTATTAAAT ACGCAGAGGA ACAAATTATT CGTAAGGTCG GTAAAACTGG CAAATAG
 
Protein sequence
MSRIGKKPIE IPDSVDISIN NNEVTVKGPK GELSQVVDQS IILEEEEGQL LVKRPTDSNH 
HKSLHGLSRS LIANMVEGVT NGFERHLEIV GVGYRAQMQG KNLVLNVGYS HPVTIEPPEG
VEIEVPKNNQ IIVKGTDKEV VGQVAARIRA VRKPEPYKGK GIKYAEEQII RKVGKTGK