Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_4966 |
Symbol | |
ID | 4595337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008697 |
Strand | + |
Start bp | 297970 |
End bp | 300246 |
Gene Length | 2277 bp |
Protein Length | 758 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639772748 |
Product | MMPL domain-containing protein |
Protein accession | YP_919408 |
Protein GI | 119714266 |
COG category | [R] General function prediction only |
COG ID | [COG2409] Predicted drug exporters of the RND superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.586388 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00568973 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTCGCAA CACGTTCGAA GGACCTTGAA GGCCACCGCG TGCACGCGAG TGGTACGTCG ATCACCCAAC GGCTGGCCCG AGCAGCGGCG GTACACCCGT GGCGGGTTGT GGTCGCGTGG GGGCTGATCC TGCTCGCTTC CATGGCGGCC ATCGCCACCC TGATCGGGTC GGCGTTCACC TCCGACGGCA ACATCACCAG CAACCCCGAG TCGGCGAGGG CCGGACAGGT CATGGCGGAG AACTTCTCCC AGGACGACCG CATCGACGAC GCCGTGATCA TCTACTCGGC CGACCTCACC GCCGAGAATC CGGAGTTCCG GGCCTTCGTC GCCGATTTCC GGTCCTCAAT CGAAACCACG GGTGCTGCAG AGACGGTCCG GGACCCTTAC GCCGCCGACG GGGCTGGCGT CTCCCAGGAC GGACACGCCG CCGTCGTCAC GCTGGTCCTC GGCCACGATT CCGCGACCGG GATCGTGGAC GTGATTGACG AGGTCGTCGC CGCGGACGCC GACGCGGCCT TCGAGGTCGA CATCACCGGC ACCAACACCC TCGACCACGA CTTCACCGAG CTCTCGGAGT CCGACCTCAC CAACGGTGAG GTGAAGTTCG GGCTGCCAGC AGCAATGATC GTGCTGGTCC TGGTCTTCGG CGCTCTGGTG GCCGCCTTCC TACCGATGAG CATCGCCATC CTGTCGATCA TCGTGACCGT CGCCATCTCC TCGATCCTCG GCCAGTTCAC CTCCCTGTCC TTCTTCATCG TCAACATGAT CACCGCGATG GGGCTCGCCC TCGGCATCGA CTACAGCCTC TTCGTGCTCT CGCGCTACCG AGAGGAGCGT CAGGCCGGCC GCGACAAGAT CGACGCGATC ATCGCCACCG GAGGCACCAG CAGCAAAGCC GTCCTGTTCT CCGGCAGCTC GTTCGTCGTC GCCCTGCTCG GACTCCTCCT GGTCCCGGAC ACCATCCTGC GCAGCCTGGC CCTCGGCGCG ATCATCGTCG GCCTGGTCAC CATGGCCGCC GCCCTCACCC TGCTGCCCGC CCTGCTGTCC CTGCTCGGCG ACCGGGTCAA CGCCCTGCGG CTGCCGATCG TCGGTCGCGA CCACCCCGCC GAGAGCCCCT TCTGGACACG CGCCGTCAGT GCTGTAGTCC GCCGACCAGG CACCTTCCTG GCAGCCGGCC TGCTGGTCCT GCTCGCCGCA GCCCTCCCCG TGTTGGGCCT CCACACCGGC ACCTCAGGCG TCAACTCGCT GCCCGACGAC ACCTACGCCA AGGCCGGCGC CCTCGCCCTC GAACGGAGCT TCCCGGGCAC CAGCACGACC GACCCCGCCC AGGTCGTCAT CTCGGGCGAC GTCACCTCCA GCGACGTCAC CGCAGCGATC GCGGAGCTCG AGGCGTCCGT CGCCGACGAC CCGGACTTCG GCCCCTCGCA GCAGCGGCTC GCCGAGAACG GTCAAGTGGC CGTGGTCAGC ATCCCGCTGG TCGGCGACCC AGACCATTCC CAGGCCCGCC GCGGGCTCGA CCGGCTCCGC ACCAACCTGA TCCCCGCCGC CTTCGACGGG ACCGACACCA CCGTGCTGGT CGGCGGCACC ACCGCCGAGA ACGTCGACTA CTCCGACGTC ATCAACCACT GGCTGCCGTT AGTGCTCGCC TTCGTCCTCG GGCTGAGCTT CCTCCTGCTC ACCCTGGTCT TCCGCTCCCT GGTCCTCTCC GCCACCGCGG TCGTCCTCAA CCTGCTCTCG GTCGGCGCGG CCTACGGCCT GCTCGTGCTG GTCTTCCAGC ACGGGGTCGG GGCCGACCTA CTGGGCCTCC AGCAGGTCGA ACGGGTCGAG GCGTGGGTCC CGGTGTTCCT GTTCTCGGTG CTGTTCGCAC TCTCGATGGA CTACCACGTC TTCCTGCTCA GCAGGATCCG GGAACGCTAC GCACAGACCG GCGACACCAA CGAAGCCGTC GTGCACGGCA TTGCCGCCAC CGGCCGCCTC ATCACCGGAG CCGCGCTGAT CATCGTGGTC GTCTTCACCG GCTTCGCCGC CGGCCAGCTC GTCATGTTCC AACAGATGGG CTTCGGTGTC GGCGTCGCCC TGCTCGTCGA CGCCACCCTC ATCCGAATGG TCGTCGTCCC CGCCGCGATG GCCCTCCTCG GCAAGTGGAA CTGGTACCTG CCCAGCTGGC TCAACTGGCT CCCCGAGCTC CACGTCGAGG GCGACCCCGA CTCCCTGGCA CCCACCGCCG ATGCGCCCAT TGCTGTGGCA GCCCCGCGGA CCCCGATCTC GGTGTAG
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Protein sequence | MFATRSKDLE GHRVHASGTS ITQRLARAAA VHPWRVVVAW GLILLASMAA IATLIGSAFT SDGNITSNPE SARAGQVMAE NFSQDDRIDD AVIIYSADLT AENPEFRAFV ADFRSSIETT GAAETVRDPY AADGAGVSQD GHAAVVTLVL GHDSATGIVD VIDEVVAADA DAAFEVDITG TNTLDHDFTE LSESDLTNGE VKFGLPAAMI VLVLVFGALV AAFLPMSIAI LSIIVTVAIS SILGQFTSLS FFIVNMITAM GLALGIDYSL FVLSRYREER QAGRDKIDAI IATGGTSSKA VLFSGSSFVV ALLGLLLVPD TILRSLALGA IIVGLVTMAA ALTLLPALLS LLGDRVNALR LPIVGRDHPA ESPFWTRAVS AVVRRPGTFL AAGLLVLLAA ALPVLGLHTG TSGVNSLPDD TYAKAGALAL ERSFPGTSTT DPAQVVISGD VTSSDVTAAI AELEASVADD PDFGPSQQRL AENGQVAVVS IPLVGDPDHS QARRGLDRLR TNLIPAAFDG TDTTVLVGGT TAENVDYSDV INHWLPLVLA FVLGLSFLLL TLVFRSLVLS ATAVVLNLLS VGAAYGLLVL VFQHGVGADL LGLQQVERVE AWVPVFLFSV LFALSMDYHV FLLSRIRERY AQTGDTNEAV VHGIAATGRL ITGAALIIVV VFTGFAAGQL VMFQQMGFGV GVALLVDATL IRMVVVPAAM ALLGKWNWYL PSWLNWLPEL HVEGDPDSLA PTADAPIAVA APRTPISV
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