Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_4940 |
Symbol | |
ID | 4595310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008697 |
Strand | + |
Start bp | 277056 |
End bp | 277883 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639772722 |
Product | ABC-2 type transporter |
Protein accession | YP_919382 |
Protein GI | 119714240 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0438009 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACGC TCACCCTGGA TACGACGATC CCCACCCCTA CCGGCCGCCC ACTCCAGGTA CGGCTGCTGG GCAACGAGAT CGCCAAGGGT CTGCGGCTGG CCTGGCACCG CAAGGGCATG ATCGTCGTCG GGACCGGGCT GGGCCTGCTG AACTACCTCG GCATCAACCT GTTCATCGGC GGCGGTCACA TCGTGACGGG CCTGATGACG CTCACCCTGC CCGCGCTGCT GGCCCTCACC GTGGCCCAGG CCGCCGCGAT CAACGGCAGC GGCGGCATCG CGGAGGAGAT CAACGGCGGC ACCCTCGAGC AGACCCGGCT CAGCCCGGCG TCGGCGTATC TCCAGGCGAC CGGCCGTATG GCGGCGCTGG CCGTCGAGGG CCTGCTCGCC GCGGCGGTGC TCGCAGCGAT CCTCACCGCG TGGTTCGGTC TCGACTACTC CGGGCACGCA TCCGCCGTGG TGCCGGCGGC GCTGACGATG CTGAACGCAC TGGCCTACGG CCTGCTGATG ACGGCGCTCA CCCTCCGGGT GGCCAGCATC GGCGCCATCA CCCACGTCTT CAACATGGCC ATCATGGTCT TCGGCGGCAT GCTGGTCCCG GTCACGGTGT TCCCTGGCCC GATCGAGACC GTCAGCCACC TGGTGCCGAC CGCGCTCGGC GTCCAGGCGT TCAACACCAC CCTGGCCGAC GGCCTCGGCC AGAGCTGGAC CGACGGGACG CTGCCGTGGC TCCTGGTCCA CACCACGGTG CTGCTCCTCG CCGGGCTGGC GACCTACGGC GCCGCCCTGC GTCGCGCGCT GCGGGAAGGA GCGCTGAGCC CCCGATGA
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Protein sequence | MTTLTLDTTI PTPTGRPLQV RLLGNEIAKG LRLAWHRKGM IVVGTGLGLL NYLGINLFIG GGHIVTGLMT LTLPALLALT VAQAAAINGS GGIAEEINGG TLEQTRLSPA SAYLQATGRM AALAVEGLLA AAVLAAILTA WFGLDYSGHA SAVVPAALTM LNALAYGLLM TALTLRVASI GAITHVFNMA IMVFGGMLVP VTVFPGPIET VSHLVPTALG VQAFNTTLAD GLGQSWTDGT LPWLLVHTTV LLLAGLATYG AALRRALREG ALSPR
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