Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_4848 |
Symbol | |
ID | 4595444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008697 |
Strand | - |
Start bp | 180258 |
End bp | 181130 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639772634 |
Product | patatin |
Protein accession | YP_919294 |
Protein GI | 119714152 |
COG category | [R] General function prediction only |
COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.939066 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACGG CGTTCGTTCT TACCGGTGGC GGAAGCCTCG GTGCCGTCCA GGTCGGCATG CTGCAGGCTC TTGCCGAGCG AGGTGTCAAG CCTGACCTGC TGATGGGTAC ATCCTGCGGC GCGCTCAACG CCGCATGGGT GGCCGGACAC GGAATGTCGA GTGACTCGCT GACCGAGCTC GCCGCGGTGT GGACCAGTCT GCGACGAAGC GACATCTTCC CCGTCGATGC CCGTCAGGTA CTGCGCGGAC TCCTCGGCTT CAGCCCTGCC GTGACCACGA ATCGCAAGCT TCGCCAATTC ATCGAGACCC ATTCGAGCAT CACCGACCTC TCCCAGGCGA ATGTGCCGAC CTACCTCGTC GCCGCCGACC TGCTCAGCGG CCGCGACGTG CTGATCTCAA CCGGCGACCT CGCAACCGGT GTCCTCGCAA GCTCCGCCAT CCCCGGCGTG CTACCGCCAG TGGAACATGC CGGGGCGCAC CTCATCGACG GGGCGCTCGC GCCTCACACC GGCATTACCC AAGCCGTCGA CCTGGGCGCC TCAGTTGTCT ACGTCCTTCC CACCGGCGCC GCCTGCGCAC TGTCTCGAGC GCCGCGAACC GCGGCCGGAG TGGCGCTCCA CTCGCTCACC CTGTTGATCG AGCAGCGGCT CATCCACGAA ATCGCCGCAA CGCAGGCCGC GACCACAATC AAGCTCCTCC CGCCACTGTG CCCACTGGCA GTTTCAGCAG CCGACTTCAG CCACGCCAAG GAACTCATCA CACGCGCCCG CAGATCAAGC CTTCAATGGA TCGACTCCGG CGGCACCGAG CTCCCTGACC CTGAACGGTT CCTCACACTC CACCACCACG GCTCGGTCAG CATCGCCACA TGA
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Protein sequence | MTTAFVLTGG GSLGAVQVGM LQALAERGVK PDLLMGTSCG ALNAAWVAGH GMSSDSLTEL AAVWTSLRRS DIFPVDARQV LRGLLGFSPA VTTNRKLRQF IETHSSITDL SQANVPTYLV AADLLSGRDV LISTGDLATG VLASSAIPGV LPPVEHAGAH LIDGALAPHT GITQAVDLGA SVVYVLPTGA ACALSRAPRT AAGVALHSLT LLIEQRLIHE IAATQAATTI KLLPPLCPLA VSAADFSHAK ELITRARRSS LQWIDSGGTE LPDPERFLTL HHHGSVSIAT
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