Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_4771 |
Symbol | |
ID | 4595373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008697 |
Strand | - |
Start bp | 77241 |
End bp | 80102 |
Gene Length | 2862 bp |
Protein Length | 953 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639772560 |
Product | helicase domain-containing protein |
Protein accession | YP_919220 |
Protein GI | 119714078 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.360251 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCCC CTGCCCCCCT GGACGTCGCC GTCGGCAGCC TGGTCCGCGC CCGAGGTCGC GAGTGGGTCG TCCTGCCCGG CACCACTCCC GACTTCGTAC TCCTTCAGCC CCTCGGCGGC GGCAGCGACG ACGTCGTCGG AGTCTTTCCC GACGAGGGAG TCGAACACGC CACCTTTCCC CCGCCCACCG CCGCCGACCT CGGTGACAGC GCTTCCACTG CCCTGCTGCG CACCGCCCTG CGCGTCGGCT TCACCGCCGG AGCCGGCCCC TTCCGCTCCC TGGCGGGCAT CAGCGTCAGC CCGCGCAGCT ACCAGTACGT CCCCCTGCTC ATGGCCCTGA GACAGGAGAC CGTCCGGCTC CTGATCGCCG ACGACGTCGG CATCGGCAAA ACCATCGAGG CCGGCCTGAT CGCCGCCGAA CTGCTCGCCC AAGGCACCGT CCGGCGCCTC GCCGTCCTGT GCTCACCGGC ACTCGCCGAG CAGTGGCAGC GCGAGCTCGC CACCAAGTTC GGCATCGACG CCGCGCTCGT GCTCACCAGC ACCGTAAAGC GCCTCGAGCG CGGCCTGATG CTCAACGAGT CGCTGTTCGA CCGCTACCCG CACGTCATCG TCTCCACCGA CTTCATCAAA TCCGCCCGTC GCCGCCACGA CTTCCTTCTC CGCTGCCCCG AGCTGGTCAT CGTCGACGAA GCCCACAACT GCGTCGCCGG CGCTGGCGTC GGCCATCGGT CCCGACACCA GCGCTACGAG CTGCTGCGTG ACCTGGCCGC CGATGCGACC CGCCACCTCG TGATGGCCAC CGCAACCCCG CACTCCGGCG ACGAGGCCGC GTTCACCAAC CTGGTCGGCC TCTGCAACCC CGAGCTCGCC ACGGCCGACC TCAGCTCCGA GAAGGGCCGC CGCCTTCTCG CCCAGCACTT CGTGCAACGC CGCCGCGCGG ACATCCGCCA CTACCTCGAC GAGGACACCC CATTCCCCAA GGACCGCCTG ACCCTCGACG TTCCCTACAC GCTCTCGCCG GCCTACCGCG ACCTGTTCGA CGATGTTCTC GCCTACGCCC GCGAGCAGGT CCGCGACGGC GTCGACGGCA CGCGTGGACG CGTCCGATGG TGGTCTGTCC TCGCACTGCT CCGAGCGCTC GCCTCCAGTC CCCAGGCGGC AGCCGCGACT CTGCGAACGC GCGCAGCCAA CGCCGAGGCC ACCACCGCTC AGGAGGCCGA TGAACTTGGC CGGGCTGCCG TCCTCGACAG CGCTGACGAC GAGTCACTCG AAGGGATCGA CACCACGCCC GGCGCACTCA CCGACGACGA GACCAGCGCC GGTACCGACA CTGCCGAGCG GCGGCGCCTG CTCGGATTCG CTCGGCGGGC CGCCGACCTC GCCGGGCCGG ACCACGACCG CAAGCTCGCC GCCGTCACCA CCCAGGTCAA GAAACTCCTA GCGGACGGCT ACAGCCCGAT CGTGTTCTGC CGCTTCATCG ACACCGCCCA CTACGTGGCG GCTCACCTCA ACACGGCACT CGGCACCAAG AGAAACCCCG TGCACGTCGT CAGCGTCACC GGCGAGCTCC CACCCGCCGA GAGGGAACGC CGCGTGGGCG AGCTCACCGA ACTCGACGGC GAACACGTCC TCGTCGCCAC CGACTGCCTC TCCGAAGGTG TCAACCTGCA GGAGCACTTC TCCGCGGTCG TGCACTACGA CCTGTGCTGG AACCCCACCC GCCACGAGCA GCGCGAAGGA CGGGTCGACC GCTACCTTCA GCGGAAGGAG GTCGTCCGCG CCGTCACCCT TTACGGCGAG GACAACGGCA TCGACGGCAT CGTCCTCGAC GTCCTCATCC GCCGCCACCG TGCGATCGCC AAGGCCACCG GCGTGGCGGT TCCCGTCCCC GGCGACGGCC AAGGCCTCAT CGACGCCCTC GCCGAGGGCC TGCTGCTACG CCGCCAGGAC TCCCGCGATC AGCTCGTCCT GGACCTCGGA CTGGACGAGC GCACCCAACA GCTCGAGGAC GCCTGGACCT CTGCGGCCGA GCAGGAGAAG GTCTCCCGCA CCCGCTACGC CCAGCACGCG ATCAAGCCTG AGGAAGTCGC GGCCGAGGTC GAGGAGCTCC ACGCCGCGCT GGGAACCCAT GGCGACCTCG AGACCTTCCT CACCGGCACC CTGCGCGCTC TCGGCTCCAC CCTGACCACC GGGACCGACG CCTTCACCGC CGTCACCGCC ACCCTGCCCC TCGGCCTGCG CACCGCCCTG CCGGTCGGGA TCCGCGACCC GCTGCCGTTC CACTCAGAGC CGCCCGCAGG CCGCGGTGAG GCGGTCATCG CCCGCACCGA CCCCACCGTC CAGGCAATCG CCCGCTACGT GCTCGAGAGC GCACTCGACC CCACCGTGCC AGCCCCGGAG CGGCCAGCGC GGCGGGCCGG CGTCATGCGC ACCCGCGCCG TGCAGACGCG CACCACGCTC CTGCTCGTCC GCTTCCGGTT CCAGCTGGAA CTTCCCGCAT CCGACGGGGT CCAGCAACGG GTCGCGGAGG ACGCCCGAGT CCTTGCCTTC GAGGGCACGC CATCACAAGC CCTCTGGCTC CCCGACGACC GGGCCGAGGA CCTGCTGTCA GCAACTCCGA CGGCCAACGT CATCGAGGGG GCCGCCCACG ACGCGATCAG TAAGGTTCTC GACGGACTCT CGGCGCTCAC CCCGCACCTG GAGTCAGTGG CCGACGAACA TGCGGACAGG CTGCTCGGCG CCCACCGCCG TGCCCGTACC GGCGCCGGCG CTGCCCGCCG AGGCCTTGCT GTTACTGCAC AACGCCCCGT CGATGTGCTC AGTGTCCAGC TCTTCTTGCC CGATCTCGGA GGTGCCTCGT GA
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Protein sequence | MTSPAPLDVA VGSLVRARGR EWVVLPGTTP DFVLLQPLGG GSDDVVGVFP DEGVEHATFP PPTAADLGDS ASTALLRTAL RVGFTAGAGP FRSLAGISVS PRSYQYVPLL MALRQETVRL LIADDVGIGK TIEAGLIAAE LLAQGTVRRL AVLCSPALAE QWQRELATKF GIDAALVLTS TVKRLERGLM LNESLFDRYP HVIVSTDFIK SARRRHDFLL RCPELVIVDE AHNCVAGAGV GHRSRHQRYE LLRDLAADAT RHLVMATATP HSGDEAAFTN LVGLCNPELA TADLSSEKGR RLLAQHFVQR RRADIRHYLD EDTPFPKDRL TLDVPYTLSP AYRDLFDDVL AYAREQVRDG VDGTRGRVRW WSVLALLRAL ASSPQAAAAT LRTRAANAEA TTAQEADELG RAAVLDSADD ESLEGIDTTP GALTDDETSA GTDTAERRRL LGFARRAADL AGPDHDRKLA AVTTQVKKLL ADGYSPIVFC RFIDTAHYVA AHLNTALGTK RNPVHVVSVT GELPPAERER RVGELTELDG EHVLVATDCL SEGVNLQEHF SAVVHYDLCW NPTRHEQREG RVDRYLQRKE VVRAVTLYGE DNGIDGIVLD VLIRRHRAIA KATGVAVPVP GDGQGLIDAL AEGLLLRRQD SRDQLVLDLG LDERTQQLED AWTSAAEQEK VSRTRYAQHA IKPEEVAAEV EELHAALGTH GDLETFLTGT LRALGSTLTT GTDAFTAVTA TLPLGLRTAL PVGIRDPLPF HSEPPAGRGE AVIARTDPTV QAIARYVLES ALDPTVPAPE RPARRAGVMR TRAVQTRTTL LLVRFRFQLE LPASDGVQQR VAEDARVLAF EGTPSQALWL PDDRAEDLLS ATPTANVIEG AAHDAISKVL DGLSALTPHL ESVADEHADR LLGAHRRART GAGAARRGLA VTAQRPVDVL SVQLFLPDLG GAS
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