Gene Noca_4612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4612 
Symbol 
ID4596068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand- 
Start bp4886484 
End bp4887188 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content75% 
IMG OID639779221 
ProductPadR family transcriptional regulator 
Protein accessionYP_925794 
Protein GI119718829 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.415527 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGACACC AGGGATTCAG CCGGCAGTGG GCCGGTCATG GCGAGCAGGA GTGGCACCAG 
CACGGCGGGC GGCACGGCGG CCCCTGGGGC GGGCCGTGGG GCGGCCCGGG CGGCTTCGGC 
CGGCCGGGGC ACCCGGGTCC CCCGCCGTGG GTCGCGGGCC TGTTCGGTCT CGCCCAGGGT 
GATCGCCAGC GCGGGCCGCG GGTCCGGCGC GGTGACGTGC GGACGGCGAT CCTGGACGTG 
GTGCGCACCG CGCAGTGGAA CGGCGAGCCG GTCAACGGCT ACCAGGTGAT CCAGCAGATC 
GCCGAGCGCA GCAACGGTGC GTGGCGGCCG AGCCCCGGCT CGGTGTACCC GACCATCCAG 
CAGCTCGAGG ACGAGGGGCT GCTGGCGACC GAGGACACCG GCGGTCGCCG GAGCCTGCGG 
CTCACCGCCG AGGGCGAGGC GTACGTCGCG GACCACGCCG ACGAGCTCAG CTCGGTGTGG 
GCGCCGTTCG AGGAGCCCGA GCGCGACGAG ACGCAGGGCA GGTACGCCGA CCTCAAGCCG 
GAGATCGGCC AGGTGATGGG TGCGGTGTGG CAGATCGTCA CCACCGGCAG CGAGCAGCAG 
CGCCGGGCCG CCATCGACGT GCTCGTCGAG ACCCGCCGCA AGCTGTACGG CATCCTCGCC 
GAGGGCGACC CCGAGGGTGA TGACGAGGGC GGGGACGCGT CGTGA
 
Protein sequence
MGHQGFSRQW AGHGEQEWHQ HGGRHGGPWG GPWGGPGGFG RPGHPGPPPW VAGLFGLAQG 
DRQRGPRVRR GDVRTAILDV VRTAQWNGEP VNGYQVIQQI AERSNGAWRP SPGSVYPTIQ 
QLEDEGLLAT EDTGGRRSLR LTAEGEAYVA DHADELSSVW APFEEPERDE TQGRYADLKP 
EIGQVMGAVW QIVTTGSEQQ RRAAIDVLVE TRRKLYGILA EGDPEGDDEG GDAS