| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4131 |
|---|
| Symbol | |
|---|
| ID | 4596645 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 4363208 |
|---|
| End bp | 4364356 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639778737 |
|---|
| Product | putative lipid-transfer protein |
|---|
| Protein accession | YP_925315 |
|---|
| Protein GI | 119718350 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.386123 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAACG ACGTCGCGAT CGTCGGGATC GGGATGACCA AGTTCGGCCG GCAGCCCGGG
GTCACCGGCC GCCAGATGGC GGTGTCGGCG GTCCACGAGG CGTGCGCGGA CGCGGGCGTC
ACCTGGTCGG ACATGCAGTT CGCCTTCGGT GGCACCTACT CGTGCGGTGA CGCCGACACG
CTGATCTCCC TGCTCGGTCT CACCGGCGCC CCGTTCATCA ACGTCTACAA CGGCTGCGGC
ACCGGTGGCT CGTCGCTGAT CTCGGCCGCC AACGCGATCA AGTCCGGCGA GCGCGACCTC
GGGCTGGTCC TCGGCTTCGA CAAGCACCCG CCGGGGGCGT TCAACGAGTC GCCCGAGAAC
GTCGGCCTCG GCTCCTGGTA CGGCGAGACC GGGTTCATGG TCACCACGCA GTTCTTCGCC
ACCAAGATCC AGCGCTACCT CCACGAGTGG GGGGTGAGCC CGTCGGCGCT CTCGCTGGTG
GCGGAGAAGG CGTACCGCAA CGGCTCCCTG AGCGAGAAGG CCTGGCGGCA GAAGCCGGTC
GCTGCCGAAC AGATCGCCGA CGCACCGATG GTCAACGACC CGCTGACCAA GCTGATGTTC
TGCTCGCCGG GCGAGGGCGC GGTCGCGCTG ATCGTCGCGA GCGCCGAGCG GGCCCGGACG
CTGACCACGG CGCCGGTCTT CCTGAGCTCC GCCGAGCTGC GCTCGCGCCG GTTCGGGTCG
TTCGAGGTCT ACAGCCCGTG GCTCTCGCCG CACCGGGTGG ACAGCGCCAC GACCGACGCC
TCCCGGGCCG CCTTCGAGGC CGCGGGCGTC GCGCCCTCCG ACGTCCAGGT CGCCCAGATC
CAGGACACCG AGTCCGGCGC GGAGATCATG CACATGGCCG AGACCGGGCT CTGCGAGCAC
GGCGAGCAGG AGAAGCTGCT GGTCGACGGC GAGACCGAGA TCGGTGGCCG GATCCCGGTC
AACACCGACG GCGGCGTGCT CGCGAACGGG GAGCCGATCG GTGCCTCCGG GCTGCGTCAG
GTGCACGAGG TCGTGCTCCA GCTCCGCGGC CAGGCGGGGG AGCGCCAGGT TCCCGGCGGG
CCGAGCGTCG GCTTCACGCA GGTGTACGGC GCTCCCGGCA TCTCCGCATG CACCGTGCTC
ACGCGCTGA
|
|---|
| Protein sequence | MSNDVAIVGI GMTKFGRQPG VTGRQMAVSA VHEACADAGV TWSDMQFAFG GTYSCGDADT
LISLLGLTGA PFINVYNGCG TGGSSLISAA NAIKSGERDL GLVLGFDKHP PGAFNESPEN
VGLGSWYGET GFMVTTQFFA TKIQRYLHEW GVSPSALSLV AEKAYRNGSL SEKAWRQKPV
AAEQIADAPM VNDPLTKLMF CSPGEGAVAL IVASAERART LTTAPVFLSS AELRSRRFGS
FEVYSPWLSP HRVDSATTDA SRAAFEAAGV APSDVQVAQI QDTESGAEIM HMAETGLCEH
GEQEKLLVDG ETEIGGRIPV NTDGGVLANG EPIGASGLRQ VHEVVLQLRG QAGERQVPGG
PSVGFTQVYG APGISACTVL TR
|
|---|
| |