| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4000 |
|---|
| Symbol | |
|---|
| ID | 4598135 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 4221278 |
|---|
| End bp | 4222777 |
|---|
| Gene Length | 1500 bp |
|---|
| Protein Length | 499 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 639778605 |
|---|
| Product | amine oxidase (flavin-containing) |
|---|
| Protein accession | YP_925184 |
|---|
| Protein GI | 119718219 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1231] Monoamine oxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.812077 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCGTC CGGCACTGTC CCGCCGCCTC CTGCTCGGCG GCGCCGCGGC CGGCGGGCTG
GCGCTCGGCA CCGGCCCCCT GCACGACGCG GTCGCTGCCG GCTCGCGCCA GGGTGCGCTG
CCCAGGCGGG TCGACGCCGT CGTGGTCGGC GGCGGCCTCT CCGGGCTCGT CGCCGCGCGC
GACCTGGCCC GCGACGGGCA CGACGTACTG CTCCTCGAGG CGCGGGACCG CGTCGGCGGC
CGGGTGCTCA ACCACCACCT GACCGTGCCC GGAGCCCGCG GCGCCACGAT CGAGGCCGGC
GGCGCGTTCA TCGGCCCCAC CCAGGACCAC ATCGCGCGGC TCGCGCGCGA GCTGAAGGTG
CCGACGTTCC CGGAGTACAA CGAGGGCAAC AGCGTCTACG TGTCCTCGCT GACCGGCCGG
CAGGAGTACT CCGGCACGGT CCCGCCGGAC CCCACGATCC TCCCCGACGC GGCCGTCCTG
CTGACCCGCA TCGACAACAT GGCCGCCGAG ATCGCCGTCG ACGCGCCGTG GACCCACCCC
AGCGCCGCCG AGTGGGACGC GATGACGCTC GGCGAGTGGA TCCGCGCCAA CGCGGTCAAC
GGCGACGGCG TCGAGAACCT CATCGAGTGC TGGACCCAGC CGGGGTTCGG CGCCGACCCC
AACGAGCTGT CCCTGCTCTA CGTGCTCTGG TACGTCGCGT GCTCGGGCAA CGAGCGCAAC
GTCGGGACGT TCTCGCGCAA CTCCGACACC GCCAACGGCG CCCAGGAGCG CCGCTTCGTC
GGGGGCTCGC AGCTGGTCCC GCTCCGGCTG GCGCGCCGGC TGGGCGACGT CGTGGCCCTG
CGGGCGGCGG TGCGCCGCAT CGAGCAGCGC GACGGCCACG TGCTCGTGCA CAGCGCCCGC
GGCACCGTCC GCGCCCGCCG TGTCGTCGTG GCGGCGCCAC CGCCGCTGGT GCTCGGCATC
GAGTGGTTCC CCCGCCTCCC CACCCGGCGC CTGCAGCTGC TGCGCCACCT CGACATGGGC
CAGCTGATGA AGTGCGACGC GGTCTACCGC ACGCCGTTCT GGCGCGACGC CGGGCTCAAC
GGCTTCGGCA TCAACGACGC CGGCGCGGCC CGCGCGGTGT TCGACAACTC GCCGGCCGAC
GGCGAGCCGG GGGTGCTGCT GGCCTTCGTC GGGGGCTCCA CCTGGCGTCA GTACGGCGTG
CTGCCGCGCG CCGAGCGCAA GCGCGCGGTG CTCGAGGGCT TCGCGGCGAT GTTCGGTGAG
CAGGCGCTGC ACCCGATCGA GTACGTCGAG CAGGACTGGA CCGAGGAGCG CTGGACCACC
GGCGGGCCGG TCGCCAACTA TGCACCCGGG ACCATGGTGC AGCTCGGGTC CGCGATCCGG
CAGCCGTTCG GCCGCGTGCA CTGGGCCGGC ACCGAGACCT CGACGTACTG GACCGGCTAC
ATGGACGGTG CCGTGCGCGC CGGCGAGCGC GCGGCGATCG AGGTCGGGGA GCGCCTGTGA
|
|---|
| Protein sequence | MPRPALSRRL LLGGAAAGGL ALGTGPLHDA VAAGSRQGAL PRRVDAVVVG GGLSGLVAAR
DLARDGHDVL LLEARDRVGG RVLNHHLTVP GARGATIEAG GAFIGPTQDH IARLARELKV
PTFPEYNEGN SVYVSSLTGR QEYSGTVPPD PTILPDAAVL LTRIDNMAAE IAVDAPWTHP
SAAEWDAMTL GEWIRANAVN GDGVENLIEC WTQPGFGADP NELSLLYVLW YVACSGNERN
VGTFSRNSDT ANGAQERRFV GGSQLVPLRL ARRLGDVVAL RAAVRRIEQR DGHVLVHSAR
GTVRARRVVV AAPPPLVLGI EWFPRLPTRR LQLLRHLDMG QLMKCDAVYR TPFWRDAGLN
GFGINDAGAA RAVFDNSPAD GEPGVLLAFV GGSTWRQYGV LPRAERKRAV LEGFAAMFGE
QALHPIEYVE QDWTEERWTT GGPVANYAPG TMVQLGSAIR QPFGRVHWAG TETSTYWTGY
MDGAVRAGER AAIEVGERL
|
|---|
| |