Gene Noca_3998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3998 
Symbol 
ID4598133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp4219565 
End bp4220491 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content76% 
IMG OID639778603 
Productribokinase-like domain-containing protein 
Protein accessionYP_925182 
Protein GI119718217 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0662614 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATCG CCACCGTCGG CGTGCACGTC CTCGACACCC ACGTGCTCGG CATCGAGTCG 
ATCCCCGCGC GCTCCGACGG CCAACTGGTC GAGACGATCC GGATGTCCCC GGCCGGCACG
GCGGGCGGTA CGGCGGTCGT GCTCAGCCGG CTCGGCGCCG AGGTGCGGAG CTTCGGCGCC
GTCGGCGCGG ACCCGATCGG CAGCACCCTC CTCGCGCTGC TCGAGCGCGA GGGGGTCGAC
GTCACGGGGC TGGTCCGCAA GCCCGACCAG CAGACCTCGG CCTCGGTGCT GCCGGTGCGG
CCCAACGGCG ACCGCCCGGC CTGGCACTGC ATCGGCGCGA ACGGGGCGTT CACCCTCGAC
GACCTCGACC TCGCTGCCCT CGACGGGTGC ACCCACGTGC ACCTGGGCGG GCCGGAGTTC
CTCGGCGGCG AGGCCGCCGG CAAGCTGCTC GAGCACGCGC GCTCGCTGGG GGCGACCACC
TCGCTGGACC TGCTGGCTCC GGGCGACCCC GACCTGCTCG CCTGGGTGGC CGACGCGCTC
CCGCACACCG ACTACCTGCT CCCCAACGAC GAGCAGGTGC TCGGCTTCAC CGGCGCGTCC
TCGATCGCCG ACGGCGCCCG GGCGCTCGTC GCCGCCGGCG CGGGCTGCGT GGCGGTGACC
CAGGGCAGCC GCGGCGCGCT GGTCGTGACC GCGGACGAGG TGGTCGAGGT GCCGGCGTAC
GCCATCGAGG TCGTCGACAC CACCGGCTGC GGCGACGCCT TCTCCGCGGG CTTCCTCCGC
GGGCTGTCGC TGGGCCGTGA CCTCCGGGAC GCCGCGGAGC TCGGCTGCGC CACCGCGGCC
CAGGTCGCGC AGGGCCTCGG CACCGACGCC GGCGACTACT CGCTGGACTC GGTGCTGGCC
TTCGCCGGGT CGACCGCCAC CCGCTGA
 
Protein sequence
MKIATVGVHV LDTHVLGIES IPARSDGQLV ETIRMSPAGT AGGTAVVLSR LGAEVRSFGA 
VGADPIGSTL LALLEREGVD VTGLVRKPDQ QTSASVLPVR PNGDRPAWHC IGANGAFTLD
DLDLAALDGC THVHLGGPEF LGGEAAGKLL EHARSLGATT SLDLLAPGDP DLLAWVADAL
PHTDYLLPND EQVLGFTGAS SIADGARALV AAGAGCVAVT QGSRGALVVT ADEVVEVPAY
AIEVVDTTGC GDAFSAGFLR GLSLGRDLRD AAELGCATAA QVAQGLGTDA GDYSLDSVLA
FAGSTATR