Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_3998 |
Symbol | |
ID | 4598133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 4219565 |
End bp | 4220491 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 639778603 |
Product | ribokinase-like domain-containing protein |
Protein accession | YP_925182 |
Protein GI | 119718217 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0662614 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATCG CCACCGTCGG CGTGCACGTC CTCGACACCC ACGTGCTCGG CATCGAGTCG ATCCCCGCGC GCTCCGACGG CCAACTGGTC GAGACGATCC GGATGTCCCC GGCCGGCACG GCGGGCGGTA CGGCGGTCGT GCTCAGCCGG CTCGGCGCCG AGGTGCGGAG CTTCGGCGCC GTCGGCGCGG ACCCGATCGG CAGCACCCTC CTCGCGCTGC TCGAGCGCGA GGGGGTCGAC GTCACGGGGC TGGTCCGCAA GCCCGACCAG CAGACCTCGG CCTCGGTGCT GCCGGTGCGG CCCAACGGCG ACCGCCCGGC CTGGCACTGC ATCGGCGCGA ACGGGGCGTT CACCCTCGAC GACCTCGACC TCGCTGCCCT CGACGGGTGC ACCCACGTGC ACCTGGGCGG GCCGGAGTTC CTCGGCGGCG AGGCCGCCGG CAAGCTGCTC GAGCACGCGC GCTCGCTGGG GGCGACCACC TCGCTGGACC TGCTGGCTCC GGGCGACCCC GACCTGCTCG CCTGGGTGGC CGACGCGCTC CCGCACACCG ACTACCTGCT CCCCAACGAC GAGCAGGTGC TCGGCTTCAC CGGCGCGTCC TCGATCGCCG ACGGCGCCCG GGCGCTCGTC GCCGCCGGCG CGGGCTGCGT GGCGGTGACC CAGGGCAGCC GCGGCGCGCT GGTCGTGACC GCGGACGAGG TGGTCGAGGT GCCGGCGTAC GCCATCGAGG TCGTCGACAC CACCGGCTGC GGCGACGCCT TCTCCGCGGG CTTCCTCCGC GGGCTGTCGC TGGGCCGTGA CCTCCGGGAC GCCGCGGAGC TCGGCTGCGC CACCGCGGCC CAGGTCGCGC AGGGCCTCGG CACCGACGCC GGCGACTACT CGCTGGACTC GGTGCTGGCC TTCGCCGGGT CGACCGCCAC CCGCTGA
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Protein sequence | MKIATVGVHV LDTHVLGIES IPARSDGQLV ETIRMSPAGT AGGTAVVLSR LGAEVRSFGA VGADPIGSTL LALLEREGVD VTGLVRKPDQ QTSASVLPVR PNGDRPAWHC IGANGAFTLD DLDLAALDGC THVHLGGPEF LGGEAAGKLL EHARSLGATT SLDLLAPGDP DLLAWVADAL PHTDYLLPND EQVLGFTGAS SIADGARALV AAGAGCVAVT QGSRGALVVT ADEVVEVPAY AIEVVDTTGC GDAFSAGFLR GLSLGRDLRD AAELGCATAA QVAQGLGTDA GDYSLDSVLA FAGSTATR
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