Gene Noca_3718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3718 
Symbol 
ID4597635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp3946332 
End bp3947525 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content74% 
IMG OID639778326 
Productglycogen synthase 
Protein accessionYP_924905 
Protein GI119717940 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID[TIGR02149] glycogen synthase, Corynebacterium family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.375533 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGAGTCG ACGTGCTGAG CAAGGAGTAC CCGCCCGAGG TGTACGGCGG CGCCGGCGTC 
CACGTGGCGG AGCTGGTCCG GGCGCTGCGG GCCCGCGACG ACGTCACCGC GCACGTGCAC
GCGTTCGGCG CGCTGCGCGA CGAGGACCGC ACGTCGTCGT ACCCCGACCT CGCCGAGCTG
GCCACCGCGA ACGCCGCGCT GCGCACGCTG GGCGTCGATC TCACGATCGC CGACGGCTGC
GCCGGCACCG ACCTGGTCCA CTCGCACACC TGGTACGCGA ACCTCGCGGG GCACCTCTCC
TCGCTCCTGT ACGACGTGCC GCACGTCGTC ACCGCACACT CGCTCGAGCC GCTGCGGCCG
TGGAAGGCCG AGCAGCTGGG CGGCGGCTAC GCGATCTCCT CGTGGGCCGA GCGCACGTCC
TACGAGGCCG CCGCCGCAGT GATCGCGGTG TCGGCGGCGA TGCGCGACGA CGTGCTCGCG
TCGTACCCGC GCATCGACGC CGACCGGGTG CACGTCGTAC ACAACGGCAT CGACACCGAG
GACTGGCGAC CGGTCGCCGA TCCCGACCGG GTGCGTGGGC TCGGCGTCGA CCCGGACCGC
CGGTCGGTGG TGTTCGTCGG CCGGATCACC CGGCAGAAGG GGCTGCCGCT GTTCCTGCGC
GCCTGCTCCG CACTGCCTCC GGACGTGCAG ATCGTGCTGT GCGCCGGCGC GCCGGACACC
CCGGAGATCA TGGCCGAGGT CGAGGGGCTG GTCGACGGGC TGCGGGCGAG CAGGGACGGG
GTCGTGTGGA TCCCGGAGAT GCTGCCGCGG CGCGACGTCG TCGCGCTCCT CACCGCCGCG
ACCGCGTTCG CCTGCCCGTC GATCTACGAG CCGCTTGGCA TCGTCAACCT CGAGGCGATG
GCCTGCGAGA CCGCCGTCGT CGCAACGGCC ACCGGCGGCA TCCCGGAGGT GGTGGTCCCC
GGTGAGACCG GGCTGCTGGT GCCCATCGAG CAGGCCTCGG ACGGCACCGG CACGCCGCTG
GACCCGGATC GCTACGTCTC CGACTTCGCC GCGGCTCTCC TCGAGATCGT CTCGGATCCC
GGCCGGGCCG CCGAGCTGGG CCGCGCCGGA CGTGCCCGCG CGATCGCCGA CTTCAGCTGG
GCCGCGATCG CGGAGCGCAC CGTGGCGGTC TACCGCTCCG CGCTCGCGCG ATAG
 
Protein sequence
MRVDVLSKEY PPEVYGGAGV HVAELVRALR ARDDVTAHVH AFGALRDEDR TSSYPDLAEL 
ATANAALRTL GVDLTIADGC AGTDLVHSHT WYANLAGHLS SLLYDVPHVV TAHSLEPLRP
WKAEQLGGGY AISSWAERTS YEAAAAVIAV SAAMRDDVLA SYPRIDADRV HVVHNGIDTE
DWRPVADPDR VRGLGVDPDR RSVVFVGRIT RQKGLPLFLR ACSALPPDVQ IVLCAGAPDT
PEIMAEVEGL VDGLRASRDG VVWIPEMLPR RDVVALLTAA TAFACPSIYE PLGIVNLEAM
ACETAVVATA TGGIPEVVVP GETGLLVPIE QASDGTGTPL DPDRYVSDFA AALLEIVSDP
GRAAELGRAG RARAIADFSW AAIAERTVAV YRSALAR