| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3586 |
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| Symbol | |
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| ID | 4599465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 3803742 |
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| End bp | 3805571 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639778194 |
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| Product | hypothetical protein |
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| Protein accession | YP_924773 |
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| Protein GI | 119717808 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0749071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGGACC CCGGTCAGTT CGACGAGTTC TACAAGGACG TCCGCACGCG CCTGCTGCTG
CTGACGTACT GCCTGACCGG CGACCTCGGA TCCTCCCGTG CCGCCGTCCG CGACGCGTTC
GTGGTGGGCT CGCACCACTG GCGCAAGGTG ACCCGCCTGG AGGACCCGGA GGCCTGGGTC
CGGGTGCGCG CCTGCGCACA CGCCCAGCGC CGCCACACCG CGAAGCTCTG GCACCGCGAG
AAGGGCCTCG ACCCCGAGGT GAAGGCCACG CTGGACGCGC TCGGCAAGCT GTCGCTGGGC
CAGCGCAAGG TGCTGCTGCT GACCGAGCTG ACGACCGCCT CGCTCGCCGA GATCGCTCGC
GAGGTGGGGC TCCCCCGGCT GGAGGCCGAG CGCGAGCTGC AGACCGCGAT GTCGCGGCTC
TCCGTCCTGC GCGAGGTGCC GACCACGAGC ATCCGCACGC TCTTCGACCC GATCCGCGCC
CACGTCGACG ACGGCCGCTG GCCGCGAGCC ACGATCATCC GGCGGGCCGG GGCCGCCCGC
CGTCGTACCC ACACGGTGAT CGGCGTCGCC GCGACCGTCG CCGCCCTGGT CGTCACCGGC
ACGCTGGTCA CCGACGCGAC CGGGGTGCGG CCGACGCTGG CCGGTGAGCG GATGGAGGCC
CCCCAGGACC ACAAGCCGTC GAGCTCGCCG ACCCCAGACC CGGTCGACGT TCCCGAGGAC
ACGCTCCTCA CGGCCGAGCA GGTCGGCGCC CAGGTGCCCG GCTCGGGCTG GACGGTGACC
CGGACCGACG ACAACTCCGG TGGCGACGGC TTGGTGATGC CGTGCCAGGC GAGCCGGTAC
GCCGACCCCC GCGGCACCGC CGCCCTGGTT CGGGTCTTCG GATCCGCGGG CAAGGGCTCG
GCCGAGACGG TCCAGGCCAC GCAGGCCTCC CCCTCGGCCA AGGCCGCGGG TCGCGGCTAC
CGGACCGCGC TCTCCTGGTT CGCCGGCTGC GCCTCCGAGC GCGCCCAGCT GCTCGAGACC
CGCGAGGTTG CGGGCGTCGG CGACGAGGCG ATGCTCGTGG TGCTGCGCAC CTGGGACGCT
CCCGCCTCGA CCGTGGTCGC GGGCGTCGCC CGGACCGGGC AGCTCACGAC CACGGTCGTC
AGCCGCTCGC CGGTCGGCCG GGCGCCGGAG CTGACGAAGT CCGCCGCCCT GCTCGGGTCG
GCGGTGACCG AGCTGTGCGG CCGCACCGGC GCCGGGACCT GCTCGAGCCG GCCGCGCCTG
CGGACCGTGC CGCCGGTCCC GGTCGCGACC GTGCCCGCCA TGCTCGCCGA GGTCGACCTG
CCGCCGGTGG GAGAGGTACG CCGACCCTGG GTCGGCACCG AGCCGCGCCA GGCACGGGAC
AACGCCGCGG CCACCGGCTG CGACCGCGCG GACTTCAGCA CCAAGGCGAT GAGCAACAAC
GTCACCCGGA CGTTCCTGGT GCCCGGCGCG AAGCTGCGCG CCGAGTTCGG CCTCACCGAG
ACGATCGGCT CCCTCCCCGA ACCGAAGGCG GCCGGCTTCG TCGACGACGT CCGCGACCGG
CTGGCGAGCT GCTCGAAGAA GCAGATGGGC ACCCAGGTGG ACCGGATCCG CCAGCTCGAG
GGCAAGCACC GCGACCTCAC CGTCTGGCGG GTGACCACGG AGATCAGCGA CCAGCGGTCG
GTGAGCTACC TGATGGGCAT CGTCCGCGAC CGGACCTCCG TCGCGCAGGT CGGCTTCGTC
CCCGACCCCG CCGGCGGGAT GTCCGCCGAC GACTTCGTCG CCCTGGTCGA GCGCGCGCTC
GCGCGCCTCG AGGCGATGCC GCGCCCCTAG
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| Protein sequence | MRDPGQFDEF YKDVRTRLLL LTYCLTGDLG SSRAAVRDAF VVGSHHWRKV TRLEDPEAWV
RVRACAHAQR RHTAKLWHRE KGLDPEVKAT LDALGKLSLG QRKVLLLTEL TTASLAEIAR
EVGLPRLEAE RELQTAMSRL SVLREVPTTS IRTLFDPIRA HVDDGRWPRA TIIRRAGAAR
RRTHTVIGVA ATVAALVVTG TLVTDATGVR PTLAGERMEA PQDHKPSSSP TPDPVDVPED
TLLTAEQVGA QVPGSGWTVT RTDDNSGGDG LVMPCQASRY ADPRGTAALV RVFGSAGKGS
AETVQATQAS PSAKAAGRGY RTALSWFAGC ASERAQLLET REVAGVGDEA MLVVLRTWDA
PASTVVAGVA RTGQLTTTVV SRSPVGRAPE LTKSAALLGS AVTELCGRTG AGTCSSRPRL
RTVPPVPVAT VPAMLAEVDL PPVGEVRRPW VGTEPRQARD NAAATGCDRA DFSTKAMSNN
VTRTFLVPGA KLRAEFGLTE TIGSLPEPKA AGFVDDVRDR LASCSKKQMG TQVDRIRQLE
GKHRDLTVWR VTTEISDQRS VSYLMGIVRD RTSVAQVGFV PDPAGGMSAD DFVALVERAL
ARLEAMPRP
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