Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_3560 |
Symbol | |
ID | 4599439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 3775561 |
End bp | 3776796 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 639778168 |
Product | major facilitator transporter |
Protein accession | YP_924747 |
Protein GI | 119717782 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGACGA CCGCGCCCGC AGCGGGGCTG GCGCCGAGCA GCCGCGCCTC GCACTTCGCG CTCGCGGTGC TGGCCCTCGC GCTCGGCGGC TTCGCGATCG GCACCACCGA GTTCGTGACG ATGGGGCTGC TGCCGCAGAT CGCGGACGGG ATCGACGTCT CGATCCCGAC CGCCGGCCAC GTGATCTCGG CGTACGCGCT CGGCGTCGTC GTCGGCGCCC CGCTGATCGC GGTGCTCGGC GCCCGGCTCC CGCGGCGCGG GCTGCTGGTC GGGCTGATGG TCGCCTACGC CGCGTTCAAC CTGCTCAGCG CGGTGGCGAC CGGGTACGGC GTGCTCTTCG TCGCCCGGTT CCTCGACGGG ATGCCGCACG GCGCCTACTT CGGGGTCGCC TCGCTGGTCG CCGCGAGCCT CGCGCCGCCG GCCCGGCGTG GCCGCGCCGT GGCCTCGGTG ATGCTCGGGC TCTCGGTCGC CAACGTGGTC GGCGTCCCCG CCGCGACCTG GCTGGGCCAG CAGGCGGGCT GGCGCGCGGC GTACCTCTCG ACGGCGCTCA TCTCGGCCGC GACGATCGTG ATGGTCCTGC TCTTCGTGCC CTCGTGCCCC GGCAACCCCG CCGCGACCGG GCGTCGCGAG CTGCAGTTCT TCCGCAACGG GCAGGCGATG CTGACCCTGC TGGCGGGTGC CGTCGGCTTC GGCGGGCTGT TCGCGGTCTA CTCCTACATC GCCCCCACCG TCACCGAGGT CGGCGGGCTC GCGGAGTCCG CCGTGCCGGT GTTCACCGCC GCCTTCGGCG TCGGCATGGT CGCCGGCACC TGGCTGGCCG GCCGGCTGGC GGAGTGGTCG GTCCTCCGGT CGCTGATCTG GTCCGGCATC GGCTCCGGCC TGGTCATGCT GGTCGTCTGG GCGGCCGCCC CGCACGGGTG GCTGCTGCTG CCGGCGGTGT TCCTGGTCAC CGCGATCGGC TCGGTCCTGG TGATCAACCT CCAGCTGCGG CTGATGGCGG TCTCCGGCGA GGCGCAGACG CTGGGCGCCG CGATGAACCA CGCGTCGCTC AACCTCGCCA ACGCCCTCGG CGCCTGGCTC GGCGGCCTCG TGATCGCCGC GGGCTACGGC TACCGCGCGC CCGCGCTCGT CGGGGGCGCG CTCTCGGTGG TCGGGGTGGC CGTGCTGCTG TGGTCGGCCT CGGTCCACGG GCGCGAGGAG CGCGCCTCGG CGTACTCCGA GGCCAGCAGC TCGTAG
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Protein sequence | MTTTAPAAGL APSSRASHFA LAVLALALGG FAIGTTEFVT MGLLPQIADG IDVSIPTAGH VISAYALGVV VGAPLIAVLG ARLPRRGLLV GLMVAYAAFN LLSAVATGYG VLFVARFLDG MPHGAYFGVA SLVAASLAPP ARRGRAVASV MLGLSVANVV GVPAATWLGQ QAGWRAAYLS TALISAATIV MVLLFVPSCP GNPAATGRRE LQFFRNGQAM LTLLAGAVGF GGLFAVYSYI APTVTEVGGL AESAVPVFTA AFGVGMVAGT WLAGRLAEWS VLRSLIWSGI GSGLVMLVVW AAAPHGWLLL PAVFLVTAIG SVLVINLQLR LMAVSGEAQT LGAAMNHASL NLANALGAWL GGLVIAAGYG YRAPALVGGA LSVVGVAVLL WSASVHGREE RASAYSEASS S
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