| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3461 |
|---|
| Symbol | |
|---|
| ID | 4596242 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 3669072 |
|---|
| End bp | 3670313 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639778067 |
|---|
| Product | rod shape-determining protein RodA |
|---|
| Protein accession | YP_924648 |
|---|
| Protein GI | 119717683 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0772] Bacterial cell division membrane protein |
|---|
| TIGRFAM ID | [TIGR02210] rod shape-determining protein RodA
[TIGR02614] cell division protein FtsW |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0402831 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCGACCC CCCGCTCCGG GCTCCGGACG TCCGGCCTCA GGCCCCCCGG TCTCAGGCCC
CCCGGTCTCA GGGCCCCGGG CCTCGACTGG GTGCTGATGC TCGCCGTTCT CGGGCTGGTC
ACGCTCGGGA GCCTCCTGGT GTGGTCGGCG ACCACGCACC GAGAGGACCT CACCGGGGGT
GACCCCACGG CGTACCTGAA GAAGCAGGTC GTCAACGTGC TCATCGGTCT GGTGCTGATG
GTGGTCGTGC TCGCGACCGA CCACCGCTGG GTCCGCATCG TCGCCCCGCT GGTGTACGTC
GCCTCCCTCG GCGGCCTGGC CCTCGTGCTG ACGATGGGCA CCACGATCAA CGGCTCCCGG
TCCTGGCTGC AGCTCGGGGG GATGTCCATC CAGCCCTCCG AGTTCGCCAA GCTCGCCGTC
GTGATCGGCA TGGCGCTGTG GGTCGCGGAG CGCGCCGACG TGCGCAGGGG CCGGCCCGGC
GGCAGCCTCG GCGACGTCCT CGGCATGCTC GGCATCGCCG GGCTCCCGGC CGCGCTGATC
ATGCTCCAGC CCGACCTCGG CACGATGCTC GTGCTCTCCG CGACCGTCTT CGGGGTCCTG
GCGGTCTCCG GTGCACCGCG ACGCTGGCTG GGCCTGCTGG CCGCCGGTGG GGTCACCGCG
GCGGCCGCCG CGGTCGCTGC CGGGTTCTTG AAGCAGTACC AGGTCGACCG CTTCCTCGCG
TTCACCAACC CCGACCTCGA CCCGCGCGGG GCCGGCTACA ACGTCGAGCA GGCGCGAATC
GCGATCGGCA ACGGCGGGCT GTTCGGTCAG GGTCTCTTCG ACGGCTCCCA GACCCGCGCC
GGCTTCGTGC CCGAGCAGCA CACCGACTTC GTGTTCACGG TCGCGGGGGA GGAGCTCGGC
CTGGTCGGCG CCGGCCTCCT GATCGCCCTG CTCGGGCTCG TCATCTGGCG GGCGCTGGCG
ATCTCGGCGC GCACCGACGA CCCGTTCGGC CGGCTCGCGG CCGCCGGCAT CGCCTGCTGG
TTCGGCTTCC AGGCGTTCCA GAACGTCGGG ATGTGCCTGG GCATCATGCC GGTCACCGGC
GTCCCGCTGC CGTTCGTGTC GTACGGGGGC AGCTCGATGT TCGCCGGCAT GCTCGCGATC
GGGCTGCTCC AGAACATCCA CCTGCGCTCC ACCCAGAGCC TCCCGTTGCG CCACGCGCTG
CCGCTGCGTG CGGTCCGCTC CGGGCTCAGC GTCAGGGCTT GA
|
|---|
| Protein sequence | MPTPRSGLRT SGLRPPGLRP PGLRAPGLDW VLMLAVLGLV TLGSLLVWSA TTHREDLTGG
DPTAYLKKQV VNVLIGLVLM VVVLATDHRW VRIVAPLVYV ASLGGLALVL TMGTTINGSR
SWLQLGGMSI QPSEFAKLAV VIGMALWVAE RADVRRGRPG GSLGDVLGML GIAGLPAALI
MLQPDLGTML VLSATVFGVL AVSGAPRRWL GLLAAGGVTA AAAAVAAGFL KQYQVDRFLA
FTNPDLDPRG AGYNVEQARI AIGNGGLFGQ GLFDGSQTRA GFVPEQHTDF VFTVAGEELG
LVGAGLLIAL LGLVIWRALA ISARTDDPFG RLAAAGIACW FGFQAFQNVG MCLGIMPVTG
VPLPFVSYGG SSMFAGMLAI GLLQNIHLRS TQSLPLRHAL PLRAVRSGLS VRA
|
|---|
| |