Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_3452 |
Symbol | |
ID | 4597268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 3658808 |
End bp | 3662020 |
Gene Length | 3213 bp |
Protein Length | 1070 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639778058 |
Product | ribonuclease G |
Protein accession | YP_924639 |
Protein GI | 119717674 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1530] Ribonucleases G and E |
TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCGACG ACCTCCAGGC CGGAGCAGAA CCCACCACCG ACGCGCCCGA GCAGGCGCCC ACAGCAGAGA AGCCGGCCGC CAAGAAGGCG ACCGCTCGCA AGACCGCGGC CAAGAGGACC GCGAAGAAGG CCGCCGCCGC GGAGCCGGCC GACACCCTCG TCGACGCGCC CCTCCTCGAC GCGCCCGCCG ACGCAGGCGG CGACGCCGCG GTCGAGGCGC CCGCGAAGAA GACCGCCGCG AAGAAGACGG CCGCCAAGAA GGCCGCCGCG AAGAAGGCCC CCGCGAAGGC CGTGGCCAAG AAGTCGGCGG CGAAGAAGGC AGCGGCCGAG CCGGTACCGG CCGAGGAGGC GCCGACCCCG CCCCACGGCG ACCCGCTCGC CCAGCCGACG ACCGAGCAGG CCGGGCCGGC CGCCCCCGCG GTGCTGTTCC AGGCACCCGA GTCGACGAAG CCCGCGAAGA AGACCGCCAA GAAGGCCGCG GCCAAGAAGG CCCCGGCCAA GAAGGCCGCC GCGACGGCTC CGGACGAGGA CCAGGCGGCC GCCGACAGTG CCGAGACGGC CGAGGAGTCG GCCCGGCCGG CGAAGAAGAC CGCCGCCAAG AAGACCGCTG CCAAGAAGAC CGCCGCCAAG AAGGGCGGCG GGCGCAAGGC CGACGGATCC AGCGACCAGC CCGAGACCGC TACCGAGGAC GAGGACGACG AGACCACGCA GCCCGAGGAT GCCGAGAGCG CCGAGACCGG TGGCGAGGGC ACCGGCCGTC GTCGTCGCCG CCGTGGCGGG CGCCGTCGGC GCAAGGCCGG TGACGGTGAC AGCGGCTCGG GTGACGCGGC ACACGCGGGC CCCGGTGAGG ACGCCGAGGA CGCCTCGGAC CGCTCCGACG CCGCGGCCGC CGAGGACTCC GGCCCCGAGT CGGGTGGTGA GTCGGGGGGC GAGAGCAGCT CGCGCCGGCG CCGCCGGCGC CGCCGTTCGG GCGAGGACGG CGGCGCGTCC GCCGAGGACC CCGAGGGCAC CGTCACCCGG GTCCGCAGCC GCCGCTCCGC GGAGGACGAG ATCACCGCGG TCTCCGGCTC CACCCGCCTC GAGGCCAAGA AGCAGCGGCG GCGCGAGGGC CGCGAGGCCG GCCGTCGGCG CGCCCCGATC GTCAGCGAGG CGGAGTTCCT CGCCCGCCGT GAGTCGGTCG ACCGGGTCAT GGTCGTCCGC CAGCGCGAGG ACCTGACCCA GATCGGCGTC CTCGAGGACC GGGTCCTGGT CGAGCACTAC GTCGCGCGCG AGTCGCAGAC CTCGCTGATC GGCAACGTCT ACCTCGGCCG CGTGCAGAAC GTGCTGCCCT CCATGGAGGC GGCGTTCATC GACATCGGCA AGGGCCGGAA CGCGGTGTTG TACGCCGGTG AGGTCAACTG GTCGGCGCTG GGCCACAAGG ACGGGCAGCC GCGCAAGATC GAGTCGGTCC TCTCCTCGGG CCAGTCCGTG CTGGTGCAGG TCACCAAGGA CCCGATCGGT CACAAGGGCG CCCGCCTGAC CAGCCAGATC AGTCTCGCGG GCCGGTTCCT GGTCTACGTG CCCGACGGCA CCACCAGCGG CATCTCCCGC AAGCTCCCCG ACACCGAGCG CACCCGGCTC AAGGCGCTGC TCAAGGAGAT CGTCCCCGAC AGCGCCGGCG TCATCGTTCG CACGGCCGCG GAGGGCGCCA GCGAGGAGGA GCTCACCCGG GACGTGGAGC GGCTCAAGGC CCGCTGGGAG GACATCGAGG GCAAGGCCAA GGGCAGCGCC CCCCAGCTCC TCTACGGCGA GCCGGACCTG ACCCTCAAGG TCGTCCGAGA CCTGTTCACC GAGGACTTCT CCAAGCTGGT GATCCAGGGC GAGGACGCCT GGGACACGGT GCAGGGCTAC GTCCACCACG TCGCGCCCGA TCTGGAGGCC CGGCTCGAGC GCTACGACCC CGGCGCGGAC GGGGCGGGCG GCAAGGCCGA CGTGTTCGCG GAGTACCGGA TCGACGAGCA GATCGCCAAG GGGCTGGACC GCAAGGTCTG GCTGCCGTCG GGCGGCTCGC TGATCATCGA CCGTACCGAG GCGATGACCG TCGTCGACGT GAACACCGGC AAGTTCACCG GCTCGGGCGG CAACCTCGAG GAGACCGTCA CCAAGAACAA CCTGGAGGCG GCCGAGGAGA TCGTCCGCCA GCTCCGGCTG CGCGACATCG GCGGCATCAT CGTCGTCGAC TTCATCGACA TGGTCCTGGA GTCCAACCGC GACCTCGTGC TGCGCCGCCT GGTGGAGTGC CTCGGCCGCG ACCGGACCCG CCACCAGGTC GCCGAGGTGA CCTCGCTCGG GCTCGTGCAG ATGACCCGCA AGCGGATCGG CACCGGACTG CTCGAGGCGT TCAGCGAGAC CTGCGAGCAC TGCCAGGGAC GCGGCGTGCT GGTGCACGAG GCGCCGGTCG AGCCCCGGCG CGCGGAGGAC GACTCCCGCC GCGGCTCGGG CCGCCGCGGT CGCGGTGGCC GAGGCCGAGG CTCCGACCAG GACGCGGCGG CGAGCGCGCC GCAGAAGGCT CCTTCGCCCA AGGACGTGGC CGCGATGGCC CGGCCCGACA GCGCCGACCT CTCCACCGAG GCAGCGACCG ACGCGGCGAC CGAGGCGGCG GTGCCGGAGG TCGACGAGGT GCCACCGGTG GCGGCCGAGG AGACCCCGGA GCGACCCACG GACCAGCCGG TCGAGGCGGC GGCGCCCGTC GAGACACCGC CTGAGCCCGA GACGCCCGCC GAGCCCGAGC CGCCCAAGGT CGTGACCCGC AGCCGTCGGC GCAGCGCGAG CCGGCCCGCC GGCACCCCGA CGACGGCCAC GACGGCCACG GCGCCCGCAG CAGAGCCCGT CGCGGAGCCG GTCGTCGCGG AGCCGGTCGT CGCGGAGCCG GCCGAGGAAG CCGTCCCCGA GGCGGTCGGG GAGCCGGTTC CGGACCCGGT GCCGGAGCCC CCGAAGGTCG TCACCCGGAC CCGGCGTCGA TCCGCCAGCC GGCCCGCAGG CCCGCCGGTC ACCGAGGCGC CGGCCAGCCC GGCCAGCCCG GTGGCCGAGA CGCCCCCGCC GGGGGCCATC GGCAGCGTCG GCGTGCCGCC CGTGAGCGGT GTGGTCGAGC CCGGCACGGC GGAGGCCGAG ACCGACGACG TCCCGGCCAT CGAGCACGTG CCGATCAAGA AGAAGGGCTC ACGGAAGCGC TGA
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Protein sequence | MPDDLQAGAE PTTDAPEQAP TAEKPAAKKA TARKTAAKRT AKKAAAAEPA DTLVDAPLLD APADAGGDAA VEAPAKKTAA KKTAAKKAAA KKAPAKAVAK KSAAKKAAAE PVPAEEAPTP PHGDPLAQPT TEQAGPAAPA VLFQAPESTK PAKKTAKKAA AKKAPAKKAA ATAPDEDQAA ADSAETAEES ARPAKKTAAK KTAAKKTAAK KGGGRKADGS SDQPETATED EDDETTQPED AESAETGGEG TGRRRRRRGG RRRRKAGDGD SGSGDAAHAG PGEDAEDASD RSDAAAAEDS GPESGGESGG ESSSRRRRRR RRSGEDGGAS AEDPEGTVTR VRSRRSAEDE ITAVSGSTRL EAKKQRRREG REAGRRRAPI VSEAEFLARR ESVDRVMVVR QREDLTQIGV LEDRVLVEHY VARESQTSLI GNVYLGRVQN VLPSMEAAFI DIGKGRNAVL YAGEVNWSAL GHKDGQPRKI ESVLSSGQSV LVQVTKDPIG HKGARLTSQI SLAGRFLVYV PDGTTSGISR KLPDTERTRL KALLKEIVPD SAGVIVRTAA EGASEEELTR DVERLKARWE DIEGKAKGSA PQLLYGEPDL TLKVVRDLFT EDFSKLVIQG EDAWDTVQGY VHHVAPDLEA RLERYDPGAD GAGGKADVFA EYRIDEQIAK GLDRKVWLPS GGSLIIDRTE AMTVVDVNTG KFTGSGGNLE ETVTKNNLEA AEEIVRQLRL RDIGGIIVVD FIDMVLESNR DLVLRRLVEC LGRDRTRHQV AEVTSLGLVQ MTRKRIGTGL LEAFSETCEH CQGRGVLVHE APVEPRRAED DSRRGSGRRG RGGRGRGSDQ DAAASAPQKA PSPKDVAAMA RPDSADLSTE AATDAATEAA VPEVDEVPPV AAEETPERPT DQPVEAAAPV ETPPEPETPA EPEPPKVVTR SRRRSASRPA GTPTTATTAT APAAEPVAEP VVAEPVVAEP AEEAVPEAVG EPVPDPVPEP PKVVTRTRRR SASRPAGPPV TEAPASPASP VAETPPPGAI GSVGVPPVSG VVEPGTAEAE TDDVPAIEHV PIKKKGSRKR
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