| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3406 |
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| Symbol | |
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| ID | 4598204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 3608517 |
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| End bp | 3609128 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639778012 |
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| Product | thiamine-phosphate pyrophosphorylase |
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| Protein accession | YP_924593 |
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| Protein GI | 119717628 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0352] Thiamine monophosphate synthase |
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| TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.405155 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTACCCC GCATTCATTG CATCACCGAC TTCTCGTCGT ACGGCGACAG GGCGATCACC
CTGCTGGAGG CCGTCGTCCG TGAGGGCGTC GACGCCGTCC AGGTGCGTGC GAAGTCGGTG
TCCGACCGAG AGGTGGTTGC GTTCACCCGC GCCCTCGTGG ACCGCCTTGC GGGGACCTCG
GCGGCGGTGA TCGTGAACGA CCGCGTCGAC ATCGCGCTCA TTGCGGGAGC GCAAGGCGTC
CATCTCGGCC GTGATGACCT CGCGGTCGCC GAGGCCAGAC GCCTGGCACC GCAAGGCTTC
CTCGTCGGCG GCACCTGCCG GAACGCCGAC CAGGCCCGTG AGGCGAGGGC CCAGGGCGCC
GACTACATAG GCGTTGGACC GGTCTACGCC ACGACCACGA AGAGTGGTCT CCCGGACCCG
ATCGGGTTGG ACGCGCTGCG TGATGCGGCG CGAGTCCTGC CGGCGATCGC GATCTCTGGC
ATCAACGCCG AGCGCGCGCC CGAGGTGATG GCGGCCGGGG CCTACGGGAT CGCGGTGGCC
TCGGCCATCT GCCGATCACC TCAGCCCGGA CTGGCCGCGA GGGAACTCGT CGGCGCCGTC
GCGCTCGCAT GA
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| Protein sequence | MLPRIHCITD FSSYGDRAIT LLEAVVREGV DAVQVRAKSV SDREVVAFTR ALVDRLAGTS
AAVIVNDRVD IALIAGAQGV HLGRDDLAVA EARRLAPQGF LVGGTCRNAD QAREARAQGA
DYIGVGPVYA TTTKSGLPDP IGLDALRDAA RVLPAIAISG INAERAPEVM AAGAYGIAVA
SAICRSPQPG LAARELVGAV ALA
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