Gene Noca_3372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3372 
Symbol 
ID4598770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand- 
Start bp3572383 
End bp3573069 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content74% 
IMG OID639777979 
Producthypothetical protein 
Protein accessionYP_924560 
Protein GI119717595 
COG category[S] Function unknown 
COG ID[COG2364] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.139512 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCCAGA TCGCCACCGC CCCGCGGGGC CTCACCGACC TCGGCCCGAT CGCCCAGCTG 
CGCGCCGGCC GGTTGGCCCG CCGCCTGCCC CAGCTCTTCC TCGGGCTCGT GGCCTACGGC 
GTCTCCCTGG CCCTGATGGT CCGCGGCGAC CTCGGCCTCG CTCCGTGGGA CGTGCTGCAC 
TCCGGGCTGA TCCGCCACGT GCCGCTCACG CTCGGCCAGG CCGTGGTCGT GATGAGCTTC 
GTGGTGCTGC TCGCGTGGAT CCCGCTGCGC GAGGTGCCGG GCCTCGGCAC CATCTCCAAC 
GCCCTGGTCA TCGGCTTCTC CGCCGACGCG ACCCTGGCCC TGCTCGAGCG GCCCGACGGG 
CTGGTGCTGC GGATCGGCCT GACGATCGGC GGCGTGCTGC TCTGCGGCCT GGCCACCGCG 
CTCTACATCG GCGCCCAGCT CGGCCGCGGG CCACGCGACG GGCTGATGAC CGGCCTGGCC 
CGGCGTACCG GCCGCTCGCT GCGCCTGGTG CGCACCGGGC TCGAGCTCGG CGTCGTCGTG 
GTCGGCCTGC TGCTCGGCGG CACCCTCGGC GTCGGCACCG TGCTCTATGC GCTGGCGATC 
GGGCCGCTCA CCCAGCTCTG GCTGCCGACC TTCACCGTCG AGCTGCCGGT CAGGAATCAA 
GAAGCGATCG TGCTGGCTTC GAACTAG
 
Protein sequence
MTQIATAPRG LTDLGPIAQL RAGRLARRLP QLFLGLVAYG VSLALMVRGD LGLAPWDVLH 
SGLIRHVPLT LGQAVVVMSF VVLLAWIPLR EVPGLGTISN ALVIGFSADA TLALLERPDG 
LVLRIGLTIG GVLLCGLATA LYIGAQLGRG PRDGLMTGLA RRTGRSLRLV RTGLELGVVV 
VGLLLGGTLG VGTVLYALAI GPLTQLWLPT FTVELPVRNQ EAIVLASN