Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_3352 |
Symbol | |
ID | 4598750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 3553626 |
End bp | 3554312 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639777960 |
Product | putative transcriptional regulator |
Protein accession | YP_924541 |
Protein GI | 119717576 |
COG category | [K] Transcription |
COG ID | [COG2345] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACGAGG ACTTCGTGAC CGCCGTCAGC GGGGTCGGAG CACTGATGGA GCCGGCCCGC CGCGCCCTCT ACCTGTACGC CGCGGCCCAG GCCGAGCCGA TCAGCCGCGA GCAGGCCGCC GCGGCCTGCG AGCTGCCGCT GCACTCGGCG AAGTTCCACC TCGACCGGCT CGTCGACGAG GGCCTCCTCG AGGTCGAGTA CCGACGGCTC TCCGGTCGGT CGGGCCCGGG CGCCGGTCGT CCCTCGAAGC TCTACCGTCG GGCGGACCGC GAGGTGTCCG TCTCGCTGCC GGAGCGGCAC TACGACCTGG CCGGCGACGT GCTCGCCACC GCGATCGACG AGGCGGCCCG CGCGGGCTCC TCGGTCCAGG ACTCGGTCCT GGCCGTGGCC GAGGCCCGCG GCCAGGTGAT GGCCGCCGCC AGCGAGGTGA GCGCCGGCGA CGACCTGGAG CGGACGGCGG CGGTGCTGGC CGAGCACGGC TACGAGCCGC ACCAGGACGG CGACACCCTC AGCCTGTCCA ACTGTCCCTT CGACCGGCTC GCCCGCGACC ACGTCGAGCT GGTGTGCGGC ATGAACCTCG GCCTGGTCAA CGGCGTCATC GAGGGGCTGG GCTGTCAGTC CCTGGACGCG GTGCTCGACC CCGAGGAGGG GTTGTGCTGC GTGAAGGTGC GCAGCCGCGA GTCCTAG
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Protein sequence | MNEDFVTAVS GVGALMEPAR RALYLYAAAQ AEPISREQAA AACELPLHSA KFHLDRLVDE GLLEVEYRRL SGRSGPGAGR PSKLYRRADR EVSVSLPERH YDLAGDVLAT AIDEAARAGS SVQDSVLAVA EARGQVMAAA SEVSAGDDLE RTAAVLAEHG YEPHQDGDTL SLSNCPFDRL ARDHVELVCG MNLGLVNGVI EGLGCQSLDA VLDPEEGLCC VKVRSRES
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