Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_3126 |
Symbol | |
ID | 4595556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 3329291 |
End bp | 3330568 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | 639777732 |
Product | hypothetical protein |
Protein accession | YP_924315 |
Protein GI | 119717350 |
COG category | [R] General function prediction only |
COG ID | [COG3688] Predicted RNA-binding protein containing a PIN domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCGAGC CCGTGCTGCG CTCGCTCGCC GAGCTGCCGG AGCCTGTCCG CGCTCGCGTC GTCGCGATGA CCGCGGAGGC GCTGCCGGAC GTGCCCCGGC TGCCCGCCGC CGTACGCCGG GTGGCGGGCT TCGCCCCGAC CCGCCGCGCG CGCCTGGGCG GGACCGCGAT CGCGGGGGCG CTAGCGGACG ACGACTTCCG GGCCCGGGTC GGCACCCAGG TCGCCGCCCG GCCCGCCCCG GCCGAGGACG ACGCGGCCGC GGTGGCCGCG CACCGGTGGC TGACCCGGGC CGAGGGGTGG GAGACCGAGC TGGAGGACGC CGTACGACGC ATGTCCGAGC GCTCCGCTCC CGCTCGGCCG GACCCCGACG ACCATGAGCT CGAGCGACTG CGCGGCCGGC TCGCCGACGC CGAGCAGACG CTGCGCGACC TGCGGGCCGC ACACCGATCT GAGATCGGCG AGTACAAGAC CGAGAACGCA GCGTTGCGGC GCAAGCTCGG GGACACCCGG GCCGCCGAGC GCGAGGCGCG CGCGGCGGCC GACGAGGCCG GCCAGGCGCA GCAGGCCGCG GAGGCCCTGG CTGCGGAGCG GTGTGCGGTG CTGGAGAAGG ACAACCGGCG GCTGCGCGGG CAGCTGGAGC GGCTCGAGGC GGAGGCCGCC CGGGGCCGGC GCGACGCCCG CTCGGAGCGC GACGACGCCA CGTTGCGCGC GCGGATGCTC CTCGACACCG TGATCGACGC GGCCGCGGGC CTGCGCCGCG AGCTGGCCCT GCCGCCGGTC GCCGGGGCGC CCGGGGACCG CGTGGAGGCC GACGTGGCCG CGGCGGGGAC CCGGGAGCCG AGCGCGGCGG GCGCGCTCGG GACCTCCAGC GCCGCGCTGC TCGAGCAGTA CCTCGCGATG CCCCGGGCCC GGCTCCTCAT CGACGGCTAC AACGTGACCA AGACCGCCTG GCCGACGACA CCCCTCGAGG CGCAGCGCAA CCGCCTGGTC ACCGCGCTCG CCCCCCTGGT CGCCCGGACC CGGGCAGAGA CGACCGTGGT GTTCGACGCG GCGGACACCG ACCACCGTCC CCTGGTGCAC ACGCCACGGG GCGTCAAGGT GCTCTTCAGC CCGCGCGGGG TGATCGCCGA CGACGTGCTC CGCGACCTGG TGGCCGTCGA GCCCGAGGGC CGGGTGGTGG TCGTCGTCAC CGGTGACCGG GCGGTCGCCG AGGACGTCGC CCGCAGTGGC GCCCGGGTGA TCTCGTCCGA GGCGCTCGTC GAGGTCCTGA CCCGGTAG
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Protein sequence | MTEPVLRSLA ELPEPVRARV VAMTAEALPD VPRLPAAVRR VAGFAPTRRA RLGGTAIAGA LADDDFRARV GTQVAARPAP AEDDAAAVAA HRWLTRAEGW ETELEDAVRR MSERSAPARP DPDDHELERL RGRLADAEQT LRDLRAAHRS EIGEYKTENA ALRRKLGDTR AAEREARAAA DEAGQAQQAA EALAAERCAV LEKDNRRLRG QLERLEAEAA RGRRDARSER DDATLRARML LDTVIDAAAG LRRELALPPV AGAPGDRVEA DVAAAGTREP SAAGALGTSS AALLEQYLAM PRARLLIDGY NVTKTAWPTT PLEAQRNRLV TALAPLVART RAETTVVFDA ADTDHRPLVH TPRGVKVLFS PRGVIADDVL RDLVAVEPEG RVVVVVTGDR AVAEDVARSG ARVISSEALV EVLTR
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