Gene Noca_3126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3126 
Symbol 
ID4595556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp3329291 
End bp3330568 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content78% 
IMG OID639777732 
Producthypothetical protein 
Protein accessionYP_924315 
Protein GI119717350 
COG category[R] General function prediction only 
COG ID[COG3688] Predicted RNA-binding protein containing a PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGAGC CCGTGCTGCG CTCGCTCGCC GAGCTGCCGG AGCCTGTCCG CGCTCGCGTC 
GTCGCGATGA CCGCGGAGGC GCTGCCGGAC GTGCCCCGGC TGCCCGCCGC CGTACGCCGG
GTGGCGGGCT TCGCCCCGAC CCGCCGCGCG CGCCTGGGCG GGACCGCGAT CGCGGGGGCG
CTAGCGGACG ACGACTTCCG GGCCCGGGTC GGCACCCAGG TCGCCGCCCG GCCCGCCCCG
GCCGAGGACG ACGCGGCCGC GGTGGCCGCG CACCGGTGGC TGACCCGGGC CGAGGGGTGG
GAGACCGAGC TGGAGGACGC CGTACGACGC ATGTCCGAGC GCTCCGCTCC CGCTCGGCCG
GACCCCGACG ACCATGAGCT CGAGCGACTG CGCGGCCGGC TCGCCGACGC CGAGCAGACG
CTGCGCGACC TGCGGGCCGC ACACCGATCT GAGATCGGCG AGTACAAGAC CGAGAACGCA
GCGTTGCGGC GCAAGCTCGG GGACACCCGG GCCGCCGAGC GCGAGGCGCG CGCGGCGGCC
GACGAGGCCG GCCAGGCGCA GCAGGCCGCG GAGGCCCTGG CTGCGGAGCG GTGTGCGGTG
CTGGAGAAGG ACAACCGGCG GCTGCGCGGG CAGCTGGAGC GGCTCGAGGC GGAGGCCGCC
CGGGGCCGGC GCGACGCCCG CTCGGAGCGC GACGACGCCA CGTTGCGCGC GCGGATGCTC
CTCGACACCG TGATCGACGC GGCCGCGGGC CTGCGCCGCG AGCTGGCCCT GCCGCCGGTC
GCCGGGGCGC CCGGGGACCG CGTGGAGGCC GACGTGGCCG CGGCGGGGAC CCGGGAGCCG
AGCGCGGCGG GCGCGCTCGG GACCTCCAGC GCCGCGCTGC TCGAGCAGTA CCTCGCGATG
CCCCGGGCCC GGCTCCTCAT CGACGGCTAC AACGTGACCA AGACCGCCTG GCCGACGACA
CCCCTCGAGG CGCAGCGCAA CCGCCTGGTC ACCGCGCTCG CCCCCCTGGT CGCCCGGACC
CGGGCAGAGA CGACCGTGGT GTTCGACGCG GCGGACACCG ACCACCGTCC CCTGGTGCAC
ACGCCACGGG GCGTCAAGGT GCTCTTCAGC CCGCGCGGGG TGATCGCCGA CGACGTGCTC
CGCGACCTGG TGGCCGTCGA GCCCGAGGGC CGGGTGGTGG TCGTCGTCAC CGGTGACCGG
GCGGTCGCCG AGGACGTCGC CCGCAGTGGC GCCCGGGTGA TCTCGTCCGA GGCGCTCGTC
GAGGTCCTGA CCCGGTAG
 
Protein sequence
MTEPVLRSLA ELPEPVRARV VAMTAEALPD VPRLPAAVRR VAGFAPTRRA RLGGTAIAGA 
LADDDFRARV GTQVAARPAP AEDDAAAVAA HRWLTRAEGW ETELEDAVRR MSERSAPARP
DPDDHELERL RGRLADAEQT LRDLRAAHRS EIGEYKTENA ALRRKLGDTR AAEREARAAA
DEAGQAQQAA EALAAERCAV LEKDNRRLRG QLERLEAEAA RGRRDARSER DDATLRARML
LDTVIDAAAG LRRELALPPV AGAPGDRVEA DVAAAGTREP SAAGALGTSS AALLEQYLAM
PRARLLIDGY NVTKTAWPTT PLEAQRNRLV TALAPLVART RAETTVVFDA ADTDHRPLVH
TPRGVKVLFS PRGVIADDVL RDLVAVEPEG RVVVVVTGDR AVAEDVARSG ARVISSEALV
EVLTR