Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_3090 |
Symbol | |
ID | 4597875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 3292202 |
End bp | 3293086 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639777696 |
Product | endonuclease IV |
Protein accession | YP_924279 |
Protein GI | 119717314 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0648] Endonuclease IV |
TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.771432 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTCGACC CCGCCCTCCG CAACCCGATC GGGACCCACG TGCTCGTCGG CAAGGGCCTC GTCGACGGCG CCGTCGCGAA CGCGGACCTG GTCGCCTGCG AGACCTTCCA GGTCTTCACC GGCAACCCCC GCGGCTGGGC GCTGAGCGAG GGCAAGCCGG CCGACGACGC GCGCTTCCGC GACCTGATGG CCGCGCGCGG GACCCGGGTG TTCATCCACG CGCCGTACCT CGTGAACCTC GGCTCGCCGA CCCCGGCGAC CTACGAGCGC TCGGTGGCCT CGGTGGCGCA CAACCTCAAG CGGGCGGCGG AGATCGGCGC CGAGGGCGTC GTCGTGCACA CCGGGTCGTA CGTCGACCCC GGCGAGGGCG ACAGCCTCGC GCGGCACGCG CGCGCGATGC GGCAGGTGCG CGAGGGACTC CTGCCCCTGC TCGACGCCGT CGCCGGCGAC GATGCACCCT GGCTGCTGCT CGAGCCGACC GCCGGCCAGG GCCGCTCCCT GTGCGCCGGC GTCGAGGACC TCGCGCCGTA CCTCGAGGCC CTCGACCACC ACCCGAAGGC CGGCATCTGC CTGGACACCT GCCACGTGTT CGCCGCCGGG GCGCCGCTGG ACGAGCCGGG CGGCACCACC GCGACCGTGG ACCGGGTGGT CGAGATCGGC GGCCCGGGCC GGCTGCGGCT GGTGCACGCC AACGACTCGA TGGACGTCCG CGGCGCCTTC AAGGACCGGC ACCAGCGGAT CGGCGAGGGC CACATCGGCG AGGGCGCGTT CACCGAGCTG TTCGCGCACC CGGCCACCGA AGGCGTGCCG TTCATCCTCG AGACGCCCGA CTCGCGCGAC GTCGACAACC GCGACATCCC GCTGCTGAAG AAGCTGCGCG GATGA
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Protein sequence | MLDPALRNPI GTHVLVGKGL VDGAVANADL VACETFQVFT GNPRGWALSE GKPADDARFR DLMAARGTRV FIHAPYLVNL GSPTPATYER SVASVAHNLK RAAEIGAEGV VVHTGSYVDP GEGDSLARHA RAMRQVREGL LPLLDAVAGD DAPWLLLEPT AGQGRSLCAG VEDLAPYLEA LDHHPKAGIC LDTCHVFAAG APLDEPGGTT ATVDRVVEIG GPGRLRLVHA NDSMDVRGAF KDRHQRIGEG HIGEGAFTEL FAHPATEGVP FILETPDSRD VDNRDIPLLK KLRG
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