Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_2949 |
Symbol | |
ID | 4595733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 3133283 |
End bp | 3135763 |
Gene Length | 2481 bp |
Protein Length | 826 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639777554 |
Product | DNA topoisomerase IV subunit A |
Protein accession | YP_924138 |
Protein GI | 119717173 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0430579 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACGAG GCAAGACGAC GAAGGACCTC CCCGACGACT TCGAGGAGCA CATCCTCGAC ACCGACATCA AGCAGGAGAT GGAGTCGTCC TTCCTGGAGT ACGCCTACTC CGTCATCTAC TCCCGGGCGC TCCCCGACGC CCGGGACGGG CTCAAGCCCG TGCAGCGCCG GATCCTCTAC ACGATGAACG ACATGGGCCT GCGGCCCGAC CGCGGCCACG TGAAGTGTGC CCGCATCGTC GGTGAGGTGA TGGGCCGGCT GCACCCGCAC GGCGACAGTG CCATCTACGA CGCGCTGGTC CGGGTCGCGC AGCCGTGGGC GATGCGGCTG CCGATGGTCG ACGGGCACGG CAACTTCGGC TCCCCGGGCG GCGACGACCC GCCGGCGGCG ATGCGCTACA CCGAGGCGCG GATGGCCCCG CCGGCGGTGG CGATGACCGC CTCGATCGAC GAGGACACCG TCGACTTCAA GCCCAACTAC GACAGTCGCG AGCTCGAGCC GTCGGTGCTG CCGGCCGCGA TCCCGAGCCT GGTCGTGAAC GGCACGACCG GCATCGCGGT CGGCATGGCG ACCAACTGTG CGCCGCACAA CCTGGTCGAG GTGGTGCAGG CGCTGCGGCA CCTGATCACC CACCCCTCGG CGACCGTCGA GGACCTGATG CGGTTCGTCC CGGGCCCCGA CCTGCCGACC GGCGGCAAGA TCGTCGGCCT GGAGGGGGTC CGCGACGCCT ACGAGACCGG CCGCGGCACG TTCCGGATGC GTGCCACGGC CCGGGTCGAG AGCATCACCA ACCGGCGCAA GGGCATCGTC GTCACCGAGC TGCCCTACGG CGTCGGCACC GAGAAGGTCG TCGAGCGGAT CAAGACCCTC GTCCAGGGCA AGAAGCTGCA GGGCATCTCC GACATCAAGG ACCTCACCGA CCGCGAGAAC GGCCTGCGGC TGGTGATCGA GGTCAAGAAC GGCTTCGTCC CCGAGGCGCT GCTCGAGCAG CTCTACAAGC ACACGCCGAT GGAGGACACC TTCGGCATCA ACGCGGTCGC GCTGGTCGAC GGCCAGCCGC GCACGCTCTC CCTCAAGGAG CTGCTGCAGG TCTTCCTGGA CCACCGCTTC GACGTCGTAC GCCGCCGCTC GGTCTTCCGC CGCGGCAAGG CCGCCGACCG GCTGCACCTG GTCGAGGGCC TGCTGATCGC GATCCTGGAC ATCGACGAGG TCATCCAGCT GATCCGCTCC TCCGACAACG CCGCGGCCGC CAAGGAGCGG CTGATCTCGG TCTTCGACCT CAGCGAGGTC CAGGCCGACT ACATCCTCGA CATGCCGCTG CGGCGGCTCA CGAAGTTCTC CCGGATCGAG CTGGAGAAGG AGCAGGACGA CCTGCGCCGC ACGATCGAGG AGCTGGACGC GATCATCAAC GACGACAAGC TGCGTTGGAA GGTCGTCTCC GACGAGCTCG GCGAGATCGC CAAGACCTAC GGCAACCCGC GCCGCACGGT GCTGCTCGAG TCGGCCGGCA CCGCGGTCAC CGCCGCCGCC GTCCCGCTCG AGGTCGCCGA CGACCCCTGC TACGTCTACC TCTCCTCCAC CGGCCTGCTG GCCCGCACCG CGAACGCCGA CCAGCCCGGC CGCGGCGGCG GCCGCGCCAG CCACGACGTG GTCGTCTCGG CGGTCCCGGC GACCGCCCGC GGCGAGGTCG GCGGTCTGAC GAGCGCGGGG CGGCTGGTGA AGATCGGCGT GCTCGAGCTG CCGCAGCTGC CCGACACCGC CAACGATCCC CACCTGGCCG GTGGGCTGCC GGTCAGCGAG ATCCTCGCCC TCGACCCGGG CGAGCGGCTG CTCGCGCTCT GCACGCTCAC CACCGACGGC CCCGGCCTCG CGCTCGGCAC CCGCCTCGGC ACGGTGAAGC GGGTCAACCC CGAGGTGCTC GGCAAGGACG ACTGGGAGGT GATCCGGCTG GCCGACGGTG ACGAGGTGGT CGGCGCCGTC GAGCTGCGCA CCGGCCACGA GACCCTGTGC TTCATCACGA CCGACGCCCA GCTGCTCCAC TTCGGCGCCG AGGCGGTGCG CCCCCAGGGC CGCTCCGGCG GCGGCATCGC CGGCATCCGC GTGACCACCG GCGAGCGGGT CGCCTGGTTC GGGGCGATCG ACCCCGACAC CCCCGAGGGC TCGGTGGTGG TCACCGCCTC CGGGTCGGCC ACGGCGCTGC CGGGCACGGA GCCGGGCGCC GTCAAGGCGA CGCCGTTCAG CGAGTACCCC GCCAAGGGCC GGGCGACGGG CGGCGTGCGC TGCCACCGCT TCTTGAAGGG TGAGGACGCC CTGGTGTTCG CCTGGGCCGG GAGCGCGCCG GCGCGGGCGG CCGCCGCCAG CGGCGCACCC ATCGACCTCC CGCCCGCGAC CGGTCGACGC GACGGCTCCG GCGTTCCCGG CACCCAGCCG ATCGCGGCGT GCGCCGGTCC GGTCACGGAC CGGGTCGGTG TGCGAGGCTG A
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Protein sequence | MARGKTTKDL PDDFEEHILD TDIKQEMESS FLEYAYSVIY SRALPDARDG LKPVQRRILY TMNDMGLRPD RGHVKCARIV GEVMGRLHPH GDSAIYDALV RVAQPWAMRL PMVDGHGNFG SPGGDDPPAA MRYTEARMAP PAVAMTASID EDTVDFKPNY DSRELEPSVL PAAIPSLVVN GTTGIAVGMA TNCAPHNLVE VVQALRHLIT HPSATVEDLM RFVPGPDLPT GGKIVGLEGV RDAYETGRGT FRMRATARVE SITNRRKGIV VTELPYGVGT EKVVERIKTL VQGKKLQGIS DIKDLTDREN GLRLVIEVKN GFVPEALLEQ LYKHTPMEDT FGINAVALVD GQPRTLSLKE LLQVFLDHRF DVVRRRSVFR RGKAADRLHL VEGLLIAILD IDEVIQLIRS SDNAAAAKER LISVFDLSEV QADYILDMPL RRLTKFSRIE LEKEQDDLRR TIEELDAIIN DDKLRWKVVS DELGEIAKTY GNPRRTVLLE SAGTAVTAAA VPLEVADDPC YVYLSSTGLL ARTANADQPG RGGGRASHDV VVSAVPATAR GEVGGLTSAG RLVKIGVLEL PQLPDTANDP HLAGGLPVSE ILALDPGERL LALCTLTTDG PGLALGTRLG TVKRVNPEVL GKDDWEVIRL ADGDEVVGAV ELRTGHETLC FITTDAQLLH FGAEAVRPQG RSGGGIAGIR VTTGERVAWF GAIDPDTPEG SVVVTASGSA TALPGTEPGA VKATPFSEYP AKGRATGGVR CHRFLKGEDA LVFAWAGSAP ARAAAASGAP IDLPPATGRR DGSGVPGTQP IAACAGPVTD RVGVRG
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