Gene Noca_2442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2442 
Symbolfmt 
ID4598278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp2604145 
End bp2605095 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content75% 
IMG OID639777045 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_923634 
Protein GI119716669 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID[TIGR00460] methionyl-tRNA formyltransferase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0870633 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGTCG TCTTCGCCGG CACCCCCGAG GTGGCCATCC CCGTCCTGGA CGCGGTCGCC 
GCGTCCTCCC ACGAGCTCGT CGCCGTGGTC ACCCGTCCCG ACGCACCCGC CGGCCGGGGG
CGGCGGCTGC TGGCGAGCCC GGTCGCGCTC CGTGCGGAGG AGCTGGGGGT CCCGGTGCTC
AAGCCCGCCC ACCCCAAGGA TCCGGAGTTC CAGGAGCAGC TGCGCGCGCT GCGGCCGGAC
TGCTGTCCCG TCGTCGCGTA CGGCGCGCTG CTGCCGCAGG CGGCGCTCGA CATCCCGGTC
CACGGGTGGG TCAACCTGCA CTTCTCGGCG CTCCCCGCCT GGCGGGGAGC GGCCCCCGTC
CAGCACGCGA TCTGGGCCGG GGACGAGGTC ACCGGGGCCA CCACCTTCCG GATCGTCAAG
GAGCTCGACG CGGGGCCGAC GTACGGCGTG ATGACCGAAC GGATCCGCCC CACCGACACC
GCAGGGGACC TGCTCGCGCG ACTCGCCGAG GGCGGCGCGG GGCTGATGGT CGCCACGCTC
GACGGCATCG AGGACGGCTC CCTGGAGGCC CGGCCGCAGC AGGCCGAGGG GGTCTCCTAC
GCCCCGAAGG TCGAGGTCGA GGACGCACGC GTGGACTGGT CGCGACCGGC GGTCGTGATC
GACCACCAGG TGCGCGCCTG CACCCCCGCC CCGGGCGCCT GGACCACCGT GGCCGGCGAG
CGCCTCAAGC TCGGGCCGGT CACCCACGCC GATGCCCACG GCTCCCAGGG CCTCGGGCCG
GGAGAGCTGG GGGTCGGCAA GCACGACGTG CTGGTCGGCA CCGGCACCAC GGCCGTCCGG
CTCGGTGACG TGCGCCCGCA CGGCCGCAAG CAGATGGCCG CCGCGGACTG GGCCCGCGGA
GCCCGGCTGC AGACAGGTGT CCGAATCGGC GTGGCTTTCG GTGAAAGCTG A
 
Protein sequence
MRVVFAGTPE VAIPVLDAVA ASSHELVAVV TRPDAPAGRG RRLLASPVAL RAEELGVPVL 
KPAHPKDPEF QEQLRALRPD CCPVVAYGAL LPQAALDIPV HGWVNLHFSA LPAWRGAAPV
QHAIWAGDEV TGATTFRIVK ELDAGPTYGV MTERIRPTDT AGDLLARLAE GGAGLMVATL
DGIEDGSLEA RPQQAEGVSY APKVEVEDAR VDWSRPAVVI DHQVRACTPA PGAWTTVAGE
RLKLGPVTHA DAHGSQGLGP GELGVGKHDV LVGTGTTAVR LGDVRPHGRK QMAAADWARG
ARLQTGVRIG VAFGES