Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_2408 |
Symbol | |
ID | 4599508 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 2569007 |
End bp | 2569477 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 639777011 |
Product | Holliday junction resolvase-like protein |
Protein accession | YP_923600 |
Protein GI | 119716635 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) |
TIGRFAM ID | [TIGR00250] RNAse H-fold protein YqgF |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.332292 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGGCCG GCGTGCGGAT CGGCATCGAC CCCGGCGACG CCCGCATCGG GGTTGCCCGC AGCGACCCGT CGGGGTTCCT CGCCACCCCG GTGGAGACGG TGCGTCGGGG GAAGGGCGAC CTCGCGAGGA TCGGCCGGAT CCTTGCCGCC GAGGAGGACG AGGGCGCCAC CGTCCTGGAG GTGGTCGTCG GGCTGCCACG CTCGCTGTCC GGCCGCGAGG GCCCGGCGGC GGCCAAGGTC CGGGAGTTCG CCGGCCGGCT GGCGGCGCGG GTCGCGCCGG TGCCGGTGCG CCTGGTCGAC GAGCGCATGA CCACGGTGTC CGCTGAGGCT ATGCTGCGCG ACCAGGGCCG CACGGGGGGC AAGCGGCGAG CCGTCGTCGA CCAGGCAGCA GCCGTCCTGA TCCTGCAGCA CGCACTGGAC ACCGAACGCG CGACGGGGGC CGCGCCGGGC GAGATCGTCG AGGAGACGTA G
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Protein sequence | MRAGVRIGID PGDARIGVAR SDPSGFLATP VETVRRGKGD LARIGRILAA EEDEGATVLE VVVGLPRSLS GREGPAAAKV REFAGRLAAR VAPVPVRLVD ERMTTVSAEA MLRDQGRTGG KRRAVVDQAA AVLILQHALD TERATGAAPG EIVEET
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