Gene Noca_2396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2396 
Symbol 
ID4599496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp2553675 
End bp2554388 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content71% 
IMG OID639776999 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_923588 
Protein GI119716623 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.668368 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGATCG CCGGATTCCC CGCAGGCCCG TGGGGCACGA ACTGCTACGT GGCGGCCACC 
GGCCCCGGTA GCGAGTGCGT GATCGTCGAC CCCGGCAAGG ACGCCACCGA CGGCATCGCC
GAGGTCGTGC GCGAGCACCG GCTCAAGCCG GTCGCGGTGC TGGTCACCCA CGGCCACGTC
GACCACATGT GGTGCGTCGC CCCGGTCGCG GGGACGTACG ACGCGACCGC GTGGATCCAC
CCCGAGGACC GGCACCTGCT CGGGGACCCG ATGGCGGGCA TGTCCCCGGA CACCGCTCAG
CTGGTGCTGG GCAGCGGCTA CGAGTTCGCC GAGCCCGACG ACGTGCAGGA GCTCGCCGAC
CTCCAGGAGC TCGAGCTCGC GGGGCTGAGG TTCGTGGTCG ACCACACGCC CGGCCACACC
CGGGGCTCGG TCACCTTCCG CTCGCCTTTC CCGGGGGGCA CCCGGGGGGC GGAGCCCTCC
GGGAGTGACG TGTCGGAGGT GATGTTCTCC GGCGATCTGC TGTTCGCGGG CTCCATCGGG
CGGACCGACC TGCCGGGGGG CGACCACCAG ACGATGCTGC AGAGCCTCAA GAGCAAGGTG
CTCCCGCTCG CCGACGACGT CGTCGTCCTG CCGGGCCACG GCGAGCAGAC GTCCATCGGT
CGCGAGCGTG CGACCAACCC CTACCTGATT CCGTTGAGTC TCCAGGATCT GTGA
 
Protein sequence
MLIAGFPAGP WGTNCYVAAT GPGSECVIVD PGKDATDGIA EVVREHRLKP VAVLVTHGHV 
DHMWCVAPVA GTYDATAWIH PEDRHLLGDP MAGMSPDTAQ LVLGSGYEFA EPDDVQELAD
LQELELAGLR FVVDHTPGHT RGSVTFRSPF PGGTRGAEPS GSDVSEVMFS GDLLFAGSIG
RTDLPGGDHQ TMLQSLKSKV LPLADDVVVL PGHGEQTSIG RERATNPYLI PLSLQDL