| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2169 |
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| Symbol | |
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| ID | 4599076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 2320036 |
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| End bp | 2321700 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639776771 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_923364 |
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| Protein GI | 119716399 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCAGG CACGCCCCCC GAGGTCGCAG TCGCAGAACG GTCGAAGCGA AACTCCTTCC
GCGTCTCCTG GGGTAATCGG AACCCAACCC GAGATGCCGC ACCTGACCCA CCGGCAGATT
GTCACGGTGC TCGTCGGATT GATGCTGGGA ATGCTCGTCG CCGCGTTGTC GCAGACGATC
GTGGCGACAG CTCTACCGAC GATCGTCGGT GAGCTGGGCG GGCAGGACCA ACTGGCCTGG
GTGGTCTCGG CGACACTGCT GACCGCGACC GCGTCCACAC CCATCTGGGG AAAGCTCTCT
GACCTCTACG GCCGCAAGAT CATGTTCCAA GCGGCCATCG CGATCTTCCT CGTCTCCTCC
CTCGCAGCAG GTTTCTCGCA AAACATGGCC CAGCTCGTTT CGTTCCGAGC GGTGATGGGT
ATCGGTGTCG GCGGCTTGAT GGCCTTGTCC CAGGCCATCA TCGGTGACGT CGTCAGTCCG
CGGGAGCGCG GGCGGTACCA GGGCTACATC GGTTCGGTGT TCGGGCTCGC CACGGTGGCG
GGGCCGCTGT TGGGTGGCTT CCTGGTCGAG CACCTGTCGT GGCGTTGGTG CTTCTGGGTC
GGGATCCCGA TCGGGATCGT CGCGCTCGTG GTGACCGAAC GGGTTCTCCA GCTCCCGTTC
CCGCGCCGCC GCCATGCCAT CGACTGGCTC GGCGCTTTCT TGATCGTGGC CGGGGTATCC
GCCCTGCTGC TCGTCCTGTC GCTTGGCGGC AAGGAGTTCG CCTGGAACTC CGCATGGACC
TATGGCTTGA CCGCCGCAGC GATCGTCCTC CTCGCCCTTG CTGTGGTCCA GGAACGCCGA
GCTGCCGAGC CGATCATGCC GCCACGCCTG TTCGCCAACC ACACCTTCGT GATCACGAGC
CTGGCCGGCT TCGTCATCGG GGTGGCCATG TTCGGCGCCA TCATCTTCCT GCCGCAGTAC
CTCCAGATCG TCAAGGGCGA ATCGCCGACC GCCTCCGGTC TGCAGACACT CCCCCTCATG
GTGGGACTGC TGCTCACCTC GATCGGATCC GGTCGGATCA TCACCCGCAC CGGTCGCTAC
AAGATTTTCC CCGTCGCCGG GATGTTCATC GCCGCCATCG GGCTGGCATT GATGAGCACG
CTGGACGTGG ACACGTCGCT GTGGGTCGCC GGGATCTACA TGTTCGTGAC CGGCTTCGGG
ATCGGCATGA CGATGCAGGT GCTGGTACTC GCCACCCAGA ACGCCGTACC CCACGACGAC
CTGGGAGTGG CGACCTCAGG CGCGACATTC TTCCGTTCCC TGGGCGGCGC GATGGGTGTC
GCCATGTTCG GCGCCCTGCT TACGCACCGC CTCCGCGACA CCATCCCGGC CCACCTCGCC
TCAGCCGGCA TCACACCCGA CCAGATGCCG CAGGGATCAC CCACCCAGGC CACCCCCCAA
CAGATCGATC AACTACCTGA CGCCATCCAC GCCGCGGTCA CCGGTGGTTT CGCGGAAGCG
CTCCAGACGA CCTTCCTCGC CGCCGTGCCC TTCGCCCTCG CCGGATTCGT GATCCTCCTC
TTTTTGCACG AGACACCACT GCGACACAGC CGCGGGACCG CCCGCGAGGA CGACAGCCGC
GGAGCCGGGA GTCTCGTGGC CGATACCTCT ACCCACGGCG AGTGA
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| Protein sequence | MKQARPPRSQ SQNGRSETPS ASPGVIGTQP EMPHLTHRQI VTVLVGLMLG MLVAALSQTI
VATALPTIVG ELGGQDQLAW VVSATLLTAT ASTPIWGKLS DLYGRKIMFQ AAIAIFLVSS
LAAGFSQNMA QLVSFRAVMG IGVGGLMALS QAIIGDVVSP RERGRYQGYI GSVFGLATVA
GPLLGGFLVE HLSWRWCFWV GIPIGIVALV VTERVLQLPF PRRRHAIDWL GAFLIVAGVS
ALLLVLSLGG KEFAWNSAWT YGLTAAAIVL LALAVVQERR AAEPIMPPRL FANHTFVITS
LAGFVIGVAM FGAIIFLPQY LQIVKGESPT ASGLQTLPLM VGLLLTSIGS GRIITRTGRY
KIFPVAGMFI AAIGLALMST LDVDTSLWVA GIYMFVTGFG IGMTMQVLVL ATQNAVPHDD
LGVATSGATF FRSLGGAMGV AMFGALLTHR LRDTIPAHLA SAGITPDQMP QGSPTQATPQ
QIDQLPDAIH AAVTGGFAEA LQTTFLAAVP FALAGFVILL FLHETPLRHS RGTAREDDSR
GAGSLVADTS THGE
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