Gene Noca_2164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2164 
Symbol 
ID4599224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand+ 
Start bp2316611 
End bp2317240 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content71% 
IMG OID639776767 
Productregulatory protein, TetR 
Protein accessionYP_923360 
Protein GI119716395 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGAAGC TGCCGGCGAA GCTGGCCAGT CAGCTGTACG GCGCGGCCGA GTTGATCGCG 
GAGCGCGGTC TGGATGGCAC CAAGATCGAG GACATCGCCG AGGCCACGGG CATTCCCAAG 
GCCACGATCT ACTACCACCT CGATGGCAAG AACGCCGTCC TGGAGTTCCT CCTCACCGAC 
CTGCTGGAGA TGATCGCTGG GGCCGTCGGT GTTGCGGTGT CGAGCGCTGA GGACGCGCGG 
ACCCGTCTCG AGGCGGCAGT CGCCGCGCAG TTGGGCGTGA TGCTCGCGCA CCCGTTCCTG 
TGCCGGGCGC TGGTGGGCGA CCTCGGTCGG GCCACCCGGC TGCCTGACCT GGCGGTGGCG 
TTGCGCAGCG CGTTCTACGA GCCGATCGAG AAGCTGCTGG CCGACGGCGT CGCCGACGGG 
TCGCTGCGCC AGGTCGCCGA TCCGGGCGCC GTGGCCCTGA GCGTCTTCGG CGCCATCACC 
GTCGCCGGCC TCAGTGCAGC GGTCGAGGGG CCGTCCGCCG ATCCGTCCGC CGACGCAGCG 
CGCTTCTCCG CCGCGGTCGG CGAACTCATC CTCGACGGCC TCGCCACGCC TCGCCCGCGC 
GGTGGCCACG AATCGGACGA GCGGCCGTGA
 
Protein sequence
MRKLPAKLAS QLYGAAELIA ERGLDGTKIE DIAEATGIPK ATIYYHLDGK NAVLEFLLTD 
LLEMIAGAVG VAVSSAEDAR TRLEAAVAAQ LGVMLAHPFL CRALVGDLGR ATRLPDLAVA 
LRSAFYEPIE KLLADGVADG SLRQVADPGA VALSVFGAIT VAGLSAAVEG PSADPSADAA 
RFSAAVGELI LDGLATPRPR GGHESDERP